| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2777 |
|---|
| Symbol | |
|---|
| ID | 4674604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2940884 |
|---|
| End bp | 2941519 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639839834 |
|---|
| Product | cytochrome c oxidase, subunit III |
|---|
| Protein accession | YP_986994 |
|---|
| Protein GI | 121595098 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.735853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATA CGCACACCCT CCAAGCGGGC GGCGCCGCCG CCCTGGCACC GCGCCAATAC
CACCTGGCAC ACGAGCCCCA CCCCGAGAAC GGCACGTCCC TGGGTTTCTG GCTCTATCTG
ATGAGCGACT GCCTCATCTT TGCCGCCCTG TTCGCCACCT ACGGCGTGCT GGGCCGCAGC
TATGCGGCGG GCCCCACGGG CGCGCAGCTG TTCGACCTGA CGCTGGTGGC CATCAACACG
GCCTTCCTGC TGACGTCGTC CATCACCTTC GGCTTTGCCA TGCTGCAAAA GCAGGCGGGC
AACGTGCGCG GCACGCTGAC CTGGCTGGCC GTCACCGGCC TGCTGGGCCT AGCCTTCCTG
GGCGTCGAGC TGTACGAGTT TGCGCACATG ATCCACCTGG GCGCCACGCC CCAGCGCAGC
GCCTTCCTGT CGTCGTTCTT CACGCTGGTG GGCACGCACG GCCTGCACGT CACCTTCGGC
CTGATCTGGC TCGTCACGCT GATGCTGCAG ATCAGCAAAC ATGGCCTGAT CCACGAGAAC
AAGCGCCGCC TGAACTGCCT GTCCATGTTC TGGCACTTTC TGGACGTGGT CTGGATCGGC
GTCTTCACCT TTGTGTACCT GATGGGGGTG CTGTAA
|
|---|
| Protein sequence | MSNTHTLQAG GAAALAPRQY HLAHEPHPEN GTSLGFWLYL MSDCLIFAAL FATYGVLGRS
YAAGPTGAQL FDLTLVAINT AFLLTSSITF GFAMLQKQAG NVRGTLTWLA VTGLLGLAFL
GVELYEFAHM IHLGATPQRS AFLSSFFTLV GTHGLHVTFG LIWLVTLMLQ ISKHGLIHEN
KRRLNCLSMF WHFLDVVWIG VFTFVYLMGV L
|
|---|
| |