Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2746 |
Symbol | |
ID | 4673597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2907560 |
End bp | 2908447 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639839802 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_986963 |
Protein GI | 121595067 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0401587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGA CAACCTCACT CGCCATGGAC CAGCACCTCG CCGCCTTTCA GCAGCACCGC CCACGCCTGG CGGGCGTGGC CTACCGCATG CTGGGTAGCC GCCCCGATGC CGAGGACGTG CTGCAGGACG CCTGGCTGCG TTGGCAGGCG ACGGCCCTGG AGCGCGTGCA GACGGCCGAG GCCTGGCGGA TCACCACCGT CACCCGGCTG TGCGTGGACC GGCTGCGCGC CGCGCGCATA GAACGCACGG CCTATGACGG CCCCTGGCTG CCGGAACCGT GGATCCCCGG CGACAGCGCC CCGGCCGCCG ATGCACGCGC CGAACTGGCC AGCGACCTGT CCGTGGCGCT GCTCGTGGTG CTGGAGCGCC TCACGCCCGA CGAGCGCGCC GCCTTCCTGC TGCACGACGT GTTCGACAGC GACTACCCCG AGGTGGCGAG CATGCTGGGC AAGAGCGAGG CCGCCTGCCG CCAGCTGGTG CACCGCGCAC GCACCCAGGT GCGCCAGCGC AGGGCGCGCT TCACGGCCAC ACCCGAGGCG TCGCGTGCGC TGGTGGAGCG CTTCGTGCAG GCCATGCGCA CGCAGGACCA TGCGGCGCTG CTGGCGCTGT TCGCCGAGGA TGCGCAGTGG ACCGCCGACG GCGGCGGCAA GGTGCGCGCC GCCGCCAAGC TGCTGCACGG GCCGCGTGCG ATCGCACGCC TGGCCGCGTC GGTGTGGCGC CTCTACCTGA GCCACCAGAC CATGGAAGCG GTGGACGTCA ACGGCGGCCC CGGGCTGCTG CTGCGCGACG CGGGCGGCGT GCGCGCCGTC ATGGCCTTCG AGACCGACGG CGTACATATC CACGCGGTGT ATTCCGTCCT CAACCCCGAC AAGCTGCGCG GCCTGTAG
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Protein sequence | MNATTSLAMD QHLAAFQQHR PRLAGVAYRM LGSRPDAEDV LQDAWLRWQA TALERVQTAE AWRITTVTRL CVDRLRAARI ERTAYDGPWL PEPWIPGDSA PAADARAELA SDLSVALLVV LERLTPDERA AFLLHDVFDS DYPEVASMLG KSEAACRQLV HRARTQVRQR RARFTATPEA SRALVERFVQ AMRTQDHAAL LALFAEDAQW TADGGGKVRA AAKLLHGPRA IARLAASVWR LYLSHQTMEA VDVNGGPGLL LRDAGGVRAV MAFETDGVHI HAVYSVLNPD KLRGL
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