Gene Ajs_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2746 
Symbol 
ID4673597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2907560 
End bp2908447 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content73% 
IMG OID639839802 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_986963 
Protein GI121595067 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0401587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA CAACCTCACT CGCCATGGAC CAGCACCTCG CCGCCTTTCA GCAGCACCGC 
CCACGCCTGG CGGGCGTGGC CTACCGCATG CTGGGTAGCC GCCCCGATGC CGAGGACGTG
CTGCAGGACG CCTGGCTGCG TTGGCAGGCG ACGGCCCTGG AGCGCGTGCA GACGGCCGAG
GCCTGGCGGA TCACCACCGT CACCCGGCTG TGCGTGGACC GGCTGCGCGC CGCGCGCATA
GAACGCACGG CCTATGACGG CCCCTGGCTG CCGGAACCGT GGATCCCCGG CGACAGCGCC
CCGGCCGCCG ATGCACGCGC CGAACTGGCC AGCGACCTGT CCGTGGCGCT GCTCGTGGTG
CTGGAGCGCC TCACGCCCGA CGAGCGCGCC GCCTTCCTGC TGCACGACGT GTTCGACAGC
GACTACCCCG AGGTGGCGAG CATGCTGGGC AAGAGCGAGG CCGCCTGCCG CCAGCTGGTG
CACCGCGCAC GCACCCAGGT GCGCCAGCGC AGGGCGCGCT TCACGGCCAC ACCCGAGGCG
TCGCGTGCGC TGGTGGAGCG CTTCGTGCAG GCCATGCGCA CGCAGGACCA TGCGGCGCTG
CTGGCGCTGT TCGCCGAGGA TGCGCAGTGG ACCGCCGACG GCGGCGGCAA GGTGCGCGCC
GCCGCCAAGC TGCTGCACGG GCCGCGTGCG ATCGCACGCC TGGCCGCGTC GGTGTGGCGC
CTCTACCTGA GCCACCAGAC CATGGAAGCG GTGGACGTCA ACGGCGGCCC CGGGCTGCTG
CTGCGCGACG CGGGCGGCGT GCGCGCCGTC ATGGCCTTCG AGACCGACGG CGTACATATC
CACGCGGTGT ATTCCGTCCT CAACCCCGAC AAGCTGCGCG GCCTGTAG
 
Protein sequence
MNATTSLAMD QHLAAFQQHR PRLAGVAYRM LGSRPDAEDV LQDAWLRWQA TALERVQTAE 
AWRITTVTRL CVDRLRAARI ERTAYDGPWL PEPWIPGDSA PAADARAELA SDLSVALLVV
LERLTPDERA AFLLHDVFDS DYPEVASMLG KSEAACRQLV HRARTQVRQR RARFTATPEA
SRALVERFVQ AMRTQDHAAL LALFAEDAQW TADGGGKVRA AAKLLHGPRA IARLAASVWR
LYLSHQTMEA VDVNGGPGLL LRDAGGVRAV MAFETDGVHI HAVYSVLNPD KLRGL