| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2745 |
|---|
| Symbol | |
|---|
| ID | 4673501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2906568 |
|---|
| End bp | 2907236 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839801 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986962 |
|---|
| Protein GI | 121595066 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1738] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0268522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC TGAAGGCACC ATCGCGCGTG CCGTTGTACC TCTCCCTCCT GGTGGCGTTC
CATATCGCCA TCGTCATCGC CAGCAACTAT CTGGTGCAAC TGCCCATCAA TTTGCTGGGC
TTTCACAGCA CCTGGGGGGC GTTCAGCTTC CCGTTCATCT TTCTGGCCAC CGACCTGACG
GTGCGGCTCA TCGGCAAGGC CGAGGCGCGC CGCGTCATCA CCCGCGCCAT GCTGCCGGCG
CTGGTGGTGT CGTATGTGGT GGGTGTGCTG TTCCATGAAG GCCGCTTCAA CGGCTGGGCG
GCGCTGGGTG ACTTCAACAC CTTCGTGTTC CGCATCGCCT TTGCCAGCTT TGCCGCCTAC
GTGCTGGGGC AACTGCTGGA CATCCAGGTG TTCGACCGTA TCCGCCAGAG CAGCCGCTCG
TGGTGGCTGG CGCCTGCGGC GGCGTCGGTG TTCGGCCAGG CGCTGGATAC GGCGGCGTTC
TTCTCCATCG CCTTCTGGCG CAGCCCTGAC GCGTTCATGG CCGCCCACTG GGGCGAAATC
GCCGTGGTGG ACTATGTCAT CAAGCTGGCC GTGAGCCTGC TGTTCTTCGT GCCGGCCTAC
GGCGTGGCGC TGGCCGCCAT CGTGCGCAGC ATGCGCGAGG GCGCGGCCCC GCTCGCGACC
GCGCCATGA
|
|---|
| Protein sequence | MTSLKAPSRV PLYLSLLVAF HIAIVIASNY LVQLPINLLG FHSTWGAFSF PFIFLATDLT
VRLIGKAEAR RVITRAMLPA LVVSYVVGVL FHEGRFNGWA ALGDFNTFVF RIAFASFAAY
VLGQLLDIQV FDRIRQSSRS WWLAPAAASV FGQALDTAAF FSIAFWRSPD AFMAAHWGEI
AVVDYVIKLA VSLLFFVPAY GVALAAIVRS MREGAAPLAT AP
|
|---|
| |