Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2741 |
Symbol | |
ID | 4673962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2903180 |
End bp | 2903860 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639839797 |
Product | 17 kDa surface antigen |
Protein accession | YP_986958 |
Protein GI | 121595062 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.29195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA TTTTTGTCCT CGCGACCCTG GCCACGGCCG CGCTGGCCGC CCAGGCGCAG GAACAGGGCC GCGTGCTGTC GGCCACGCCC ATCACCGAGC AGATCGCGAT TCCGCAGCAG GTCTGCGGCA ACGAAACCAT CTACAGCGGC GCCCGCCCCA CCTCCGGCGC GGGCGCGGTG CTGGGCGCGA TTGCCGGCGG CGCCGCGGGC AACGCCATCG GTGGCGGCAG CGGCCGCGCC GCGGCCACGG CCCTGGGTGT GATTGGTGGC GCGGTGCTGG GCAACCAGAT CGAGGGCGGT CGCCCCGGCT ACCAGAACGT GCAGCGCTGC ACGACCGAAA CCTACTACGA CAACCAGATC GTCGGCTACG ACGTGGTCTA CGAATACGCC GGCCGGCACT ACAACACGCG CACGCAGACG GACCCAGGCG CGTGGATTCC ACTCACCGTG CAGCCGGCGG TGCCGGGAGT GTCGCGCGCT CCCGCCGGAT ACCCGCCCAC CTACGGCCCC ACCTACTCTC CTACCTATTC CGGCGGCTAT GCGCAGCCGG GCGTGGTGGT GTCCACCCAG CCGGGCCCGC CGGCCTACAT CGTGGAGCCG CCCGTCACCG TGATCGAATA CCGCGACAAC TATGGCCATC CCTACCGCCC GCCCCGCTAC CACGACCGTT ACTGGCGCTG A
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Protein sequence | MNKIFVLATL ATAALAAQAQ EQGRVLSATP ITEQIAIPQQ VCGNETIYSG ARPTSGAGAV LGAIAGGAAG NAIGGGSGRA AATALGVIGG AVLGNQIEGG RPGYQNVQRC TTETYYDNQI VGYDVVYEYA GRHYNTRTQT DPGAWIPLTV QPAVPGVSRA PAGYPPTYGP TYSPTYSGGY AQPGVVVSTQ PGPPAYIVEP PVTVIEYRDN YGHPYRPPRY HDRYWR
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