| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2735 |
|---|
| Symbol | |
|---|
| ID | 4674682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2896991 |
|---|
| End bp | 2898205 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639839791 |
|---|
| Product | O-succinylhomoserine sulfhydrylase |
|---|
| Protein accession | YP_986952 |
|---|
| Protein GI | 121595056 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.484206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGATC AACCACTGCC CGAGGGGCTG CGCCCCGAGA CCCTCGCCGT TCGCGAGGCC
GTCGCGCGCA GCCAGTGGGG CGAGCACAGC GAGGCGCTGT ACATGACCAG CAGCTTCGTG
CAGAGCGACT GCGAAAGCGC CGCACGCCGC TTCGCCAACG AAGAGCCGGG CTACACCTAC
ACCCGCACTG CCAACCCCAC GGTCAGCAGT TTCGAGCGCC GCCTGGCGGC CATGGAGGGC
ACGGAATGCG CGGTGGCCAC CAGCACCGGC ATGTCGGCCA TCCTGCTGAT GGCGCTTACC
GTGCTCAAGA GCGGCGACCA CGTGGTGGCC TCGCAGTCCA TGTTCGGCTC CACGCTCAAG
CTGCTCGGGT CGGAGCTGGC GCGCTTCGGC GTAGAGACGA CCTTTGTCTC GCAGACCGAC
CTGCAGTCGT GGGAGGCGGC CATCCGCCCG AATACCCGCT TGCTGTTTGC CGAGACACCG
ACCAACCCGC TGGGCGATCT GTGCGACATC GCCGCACTGG CGCAGATCGC GCATGCGCGC
GGCCTGCTGT TGGCGGTGGA CAACAGCTTC TGCTCGCCCG CGCTGCAGCG CCCGGCGCAA
TTGGGCGCTG ACCTGGTGGT CTACTCGGGC ACCAAACTGC TGGACGGCCA GGGCCGCGTG
ATGGCGGGCG CCGTGTGCGG CACCACCGCG CTGGTGGACA AGGTCATGGG CACCTTCATG
CGCAGCGCGG GGCTGAACCT GTCGCCGTTC AATGCATGGG TGGTGCTCAA GGGGCTGGAG
ACGCTGTCGC TGCGCGTGCG CGCGCAAAGC GCTGCGGCTT TGGAACTGGC GACCTGGCTG
GCCACACATC CCAAGGTGGC GCGCGTGCAC TATTCGGGCC TGGCTAGTCA TCCGCAGCAT
GCATTGGCCA TGCGCCAGCA GGGCGGCATG GGCGGGCCGG TGCTGGCGTT CGACGTGGTG
GGACAAGGCG CGGCGCAGTT GCGCGCGAAT GCCTTCCACG TCATCGACAG CACGCGCGTG
TGCTCCATCA CCGCCAATCT GGGCGACGTG AAGACCACCA TCACCCATCC GGCCAGCACC
TCGCACGGGC GCCTCACGGA AGAGCAGCGC CAGGCGGCCG GCATCGGCCA GGGGCTGATC
CGCGTCTCCG TAGGCCTGGA ACATATCGAC GACCTGAAGA CCGACCTCTG CCGAGGCCTG
GACACCCTGC CATGA
|
|---|
| Protein sequence | MTDQPLPEGL RPETLAVREA VARSQWGEHS EALYMTSSFV QSDCESAARR FANEEPGYTY
TRTANPTVSS FERRLAAMEG TECAVATSTG MSAILLMALT VLKSGDHVVA SQSMFGSTLK
LLGSELARFG VETTFVSQTD LQSWEAAIRP NTRLLFAETP TNPLGDLCDI AALAQIAHAR
GLLLAVDNSF CSPALQRPAQ LGADLVVYSG TKLLDGQGRV MAGAVCGTTA LVDKVMGTFM
RSAGLNLSPF NAWVVLKGLE TLSLRVRAQS AAALELATWL ATHPKVARVH YSGLASHPQH
ALAMRQQGGM GGPVLAFDVV GQGAAQLRAN AFHVIDSTRV CSITANLGDV KTTITHPAST
SHGRLTEEQR QAAGIGQGLI RVSVGLEHID DLKTDLCRGL DTLP
|
|---|
| |