Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2725 |
Symbol | |
ID | 4673111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2889275 |
End bp | 2889958 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639839780 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | YP_986944 |
Protein GI | 121595048 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGATAT TGATCGTCGA GGACGAACCC AAGACCGGGG CCTACCTGCG CCAGGGATTG AGCGAGGCGG GCTACAGCCC GGACCTGGTG CCCAATGGCG CCGATGGCCT GCACATGGCC ATCCACGGCC AGTACGACCT GGTGATCCTG GATGTCATGC TGCCGGGCCT GAACGGCTGG CAGGTGCTGC AGTCCCTGCG TGACCGGGGC CTGGAAATGC CCGTGCTGTT CCTGACCGCC CGCGATCAGG TGGAGGATCG GGTCAAGGGC CTGGAGCTGG GGGCCGACGA CTATCTCGTC AAGCCGTTCT CGTTTGCCGA GCTGCTGGCC AGGGTGCGCA TCATCCTGCG CCGCGGCCAT GCCGGCAGCG AAGGCAGCAC ACTGCGCGTG GCCGATCTGG AGCTGGATCT GCTGCGCCGC CGGGTGTCCC GCAATGGCCG GCGCGTAGAC CTGACGGCCA AGGAGTTCGG CCTGCTGGAG CTGCTGATGC GCCGCCATGG CGAGGTACTG CCGCGCTCGC TCATCGCATC GCAGGTGTGG GACATGAACT TCGACAGCGA CACCAACGTC ATCGAGGTCG CCATGCGCCG CCTGCGCGTG AAGATCGACG AGGGCCATCC GGTCAAGCTC ATCCAGACCG TGCGCGGCAT GGGCTATGTG CTGGACGTGC CGGAGGAGGC CTGA
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Protein sequence | MKILIVEDEP KTGAYLRQGL SEAGYSPDLV PNGADGLHMA IHGQYDLVIL DVMLPGLNGW QVLQSLRDRG LEMPVLFLTA RDQVEDRVKG LELGADDYLV KPFSFAELLA RVRIILRRGH AGSEGSTLRV ADLELDLLRR RVSRNGRRVD LTAKEFGLLE LLMRRHGEVL PRSLIASQVW DMNFDSDTNV IEVAMRRLRV KIDEGHPVKL IQTVRGMGYV LDVPEEA
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