Gene Ajs_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2723 
Symbol 
ID4674424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2887357 
End bp2888787 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID639839778 
Productputative copper resistance-related lipoprotein 
Protein accessionYP_986942 
Protein GI121595046 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTT GGCGTGCCTC ACATGCCAAG CTGGCGCTTT CCGCGCTCGG CCTTGTTGTG 
CTGACGGGCT GCGCCAGTGT CAGCCTGAAT CAGAACACCA GCCGCGTGAA TGACGAGGCA
GGCAGCTTCG CTGGGGGCCG GCTCGCGTTG GCCACTACCC AGGGCGAGCG CGATCAGCGT
GCGCAGGCGG CCCAGACCCT GCTTGCGCAG CCATTGGGAC AAACGCAAGC CGTTCAGTTG
GCGCTGGTGA ACAGCCCGTC CTTGCAGGTG TTGCTGGCGC AGGGCTGGGC GGAGTCTGCC
GACGCCGCGC AAGTGGGCCG GATTGCCAAC CCCATCTTCA GTTTTGAACG CATGACGTCA
GGCCCGGAGC TGGCCTTGGC GCGTGCGCTT TCATTTGGCT TGTTGGACCT GCTGACGCTG
CCGTCGCGGA ACGGTATTGC CAACCAGTTC ATTGAGCAGT CCCAACTGCG TTTGAGCGGC
GATGTCGTGG ATCAGGTCAC CCTGGTGCGC CAGGCTTGGG TACGCGCCGT CGTATCACAG
CAATCGCTCA CATATGCCAA GCAGGTCTAT GCCAGCGCGG AGGCAGGAGC GGAGCTGGCC
AAACGCATGC AAGCCGTGGG GAACTTCAAC CGCATCACCC GCGCACGCGA GCAGGCTTTC
TACGCCGACG CCGCCACCCG GTTGAGCACG GCCCAGCACC AGGTCACCGC CAGCCGGGAG
GAACTGGTTC GTTTGCTGGG CCTGGATGAA GGACAGGCGC AGGCGCTCAA GCTGCCCGAA
CGCTTGCCCG ATCTGCCCAA GCAGCCACTG GACCCGCAGG CCATCGGGTC GCAGGCCATC
AGGGCGCGCC TGGACATACG CCTGGCACAG GCTACGCTGG ACGTGGCAGC CAAGGCCCAG
GGTTTGAACA TGGTGACCAG TTTCACGGAT ATCGAACTCA CCGGGCGGCG CAATACCACC
TTCGACAATG CCGGGGGAAC CCGCTCCACC GCGCGCGGCT GGGAGATCGC GCTACGCCTG
CCTATCTTCG ATTGGGGCGG GATGCAACGC GCGGCCATGA ACGCCCGCAC CCTGGCTGCC
GCCAATCACC TCGAAGCCAC GGTGCGCTCC GCGGGCTCGA ACCTGCGCGA AAGCTACTCC
GCCTACCGCA CCGCCTACGA TGTGGCGCGC CACTACCGCG ATGAAGTCGT GCCGCTGCGC
AAGGTGATCT CGGAAGAGAA CCAGCTTCGC TACAACGGCA TGCTGATCAG CACGTTCGAG
CTGCTGGCCG ATGCGCGCGA TCAGGTCAGT GCCGTTGTCG CAGCCATGGA TGCACAGCAG
CAGTTCTGGC TGGCCGATGC CGCCTTGCAG GCATCCCTGA TCGGACGCCC AACCAGCACC
CGTTTATCCG CCACATCCAG CGCGCCCACC GGCAGCGACG TCGGCCCTTG A
 
Protein sequence
MMRWRASHAK LALSALGLVV LTGCASVSLN QNTSRVNDEA GSFAGGRLAL ATTQGERDQR 
AQAAQTLLAQ PLGQTQAVQL ALVNSPSLQV LLAQGWAESA DAAQVGRIAN PIFSFERMTS
GPELALARAL SFGLLDLLTL PSRNGIANQF IEQSQLRLSG DVVDQVTLVR QAWVRAVVSQ
QSLTYAKQVY ASAEAGAELA KRMQAVGNFN RITRAREQAF YADAATRLST AQHQVTASRE
ELVRLLGLDE GQAQALKLPE RLPDLPKQPL DPQAIGSQAI RARLDIRLAQ ATLDVAAKAQ
GLNMVTSFTD IELTGRRNTT FDNAGGTRST ARGWEIALRL PIFDWGGMQR AAMNARTLAA
ANHLEATVRS AGSNLRESYS AYRTAYDVAR HYRDEVVPLR KVISEENQLR YNGMLISTFE
LLADARDQVS AVVAAMDAQQ QFWLADAALQ ASLIGRPTST RLSATSSAPT GSDVGP