| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2707 |
|---|
| Symbol | |
|---|
| ID | 4671965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2873372 |
|---|
| End bp | 2874652 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639839764 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_986928 |
|---|
| Protein GI | 121595032 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3174] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0954887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.849841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGCT ATGGACTACC ACCGGGCACC TCGGGCTTGG TTGCCGCGCT TGCTGTCGGT
CTGGTGATTG GCCTGGAACG CGGCTGGCAT GACCGCGAAT TGCCGGAGGG AGGGCGTGTC
GCAGGTCTGC GCACCTTTGC ACTGACCGGA CTGCTCGGCG GTGTGCTGGG TCATCTGCAG
CCAGTTTTCG GCGCCTGGCC TTTGCTGGGT GCGCTGCTCG GACTCGCCTT GCTGCTGACG
GTGTCCTACG CCCGAAATGC CAAACAATCG GGCAGCCTGA GCGCCACTAC CCCGGTGGCG
ATGCTACTTA CTTTGGCCCT GGGCGCCTTT GCGGCACACG GCAACATCAC GTTGGCATTG
TCGGCAGCGG TGGTGAGTGC TGTGTTGCTG GATCTCAAGC CGACCTTGCA CGGTTGGTTG
CGCTTGATCG ATCACCGCGA ATTGACCGCA TCGTTGCAGT TGCTGGTGTT GTCCACGGTC
ATCCTGCCCT ACCTGCCGAA CACGGGTCTG GGGCCCTATG CCGCGCTCAA TCCGTACCAG
CTATGGTGGG CAGTCATCCT GATTGCAGGC CTGTCGTTGA CGGGGCACTT CGCCATGCGG
ATCACCGGCG CGCAAAGGGG TGTGCTATGG ACCGGGATTC TGGGAGGGCT GGCCTCTTCC
ACGGCTGCCA CGATGGCTTT GGCCCGTTAT GCCCGTGAGC AGCCTTCGCT GGCAGGCGCG
GCGGCGGCCG GCACGTTGGC CTCGTGTGGC GTCATGTTTT TTCGCATGGT CATTTTGCTG
GTCGTCATCC AGCCGAAGCT GCTGTCCACC TTCGGCAGCG CCCTGGTAGT CACTGGCGTG
GTGCTGCTGT GTGTTGCGCT ATGGCGGTGG CGCAAGCTCG ACCGCACAGC GGTGGAGGAG
GGCTCTGTCG GCACGATGGC GCCATTCGAC CTTGGCACTG CGCTCGGCTT TGGTGTGTTG
CTTGCTGTCA TGAGTGTCCT GGTGCCAGCG GCAAAGCAGT GGTTGGACAC CAGCGGCCTC
TATGTGTTGT CGGCGGTGTC TGGCCTGGCG GACGTGGACG CGATCTTGAT CTCGCTTGCT
CGGCTGCATG GCTCTGGAGG ATTGTCAACG GTGGCCACCG TCACGGCGCT CGGTCTTGCG
ACGTTGGCAA ACATGGTGAC CAAGGCCGGT ATCGCCTGGA CGACCGGTGG GACGCAGGTC
GGCAAGTCCG TGGTGTCCGG TTACCTGGTC GCGATGGCGT TCGGAGCGGT CGCATTGGCG
TTGAGCGTGA CACTTTCGTG A
|
|---|
| Protein sequence | MNGYGLPPGT SGLVAALAVG LVIGLERGWH DRELPEGGRV AGLRTFALTG LLGGVLGHLQ
PVFGAWPLLG ALLGLALLLT VSYARNAKQS GSLSATTPVA MLLTLALGAF AAHGNITLAL
SAAVVSAVLL DLKPTLHGWL RLIDHRELTA SLQLLVLSTV ILPYLPNTGL GPYAALNPYQ
LWWAVILIAG LSLTGHFAMR ITGAQRGVLW TGILGGLASS TAATMALARY AREQPSLAGA
AAAGTLASCG VMFFRMVILL VVIQPKLLST FGSALVVTGV VLLCVALWRW RKLDRTAVEE
GSVGTMAPFD LGTALGFGVL LAVMSVLVPA AKQWLDTSGL YVLSAVSGLA DVDAILISLA
RLHGSGGLST VATVTALGLA TLANMVTKAG IAWTTGGTQV GKSVVSGYLV AMAFGAVALA
LSVTLS
|
|---|
| |