| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2705 |
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| Symbol | |
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| ID | 4672061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2871796 |
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| End bp | 2873070 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639839762 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_986926 |
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| Protein GI | 121595030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0425807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.885603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCCA TGAGGAGTCG CCTGTCGTTG GGGTTGGTAA TGGTGTCTCT TGCCTTGAGC
CCGATGGTTT ACGCGCAAGA GTTCAAGCTG GGGTCGAATG TCGAAGGGTT ACTTCAAGCG
GCCAGGGAGC GAAACCCAGA AATCGCCGGC ATGCGTTTTG ATGCGGAGGC AGCAGCAGAA
CGCGTCGTGC CCGCGGGTGC CTTGCCGGAC CCCAAATTCA GAACCGAATT GCGTGACATC
ACGCGTATGG GGGAACAAAA CCCCACCCTG CTGCCAGGCC GCGTCGGAAG CACCCGCTAT
CTGCTGATGC AGGATCTGCC CTGGATGGGC AAACGCGGTT TGAAGCGTGA GGTGGCTGAG
TCGCAGGCAG AAGCTGCGAG AAACCGTGCA ACAGGCACCT GGGTTGAACT GGCTGGCAAG
ATCAAGACGA CTTATGCCGA GCTCTATTAC CTGGACCAAA ACGAGCGCTT GTCGCGGGAA
ATTCTCGACC TGATGGCACA GCTGGAAAAA GTCGCCCAGG TGCGCTACGC AGGCGGTCTT
GCCGCACAAC AGGATGTGAT TCGTGCGCAG GTGGAACAGT CCACCATGCG CAACGAACTG
ATTGCACTGG ATGCTGAGCG CCGTCAACTC CAGTCCAGGT TGAATGCTCT CTTGGGGCGT
CCAACCTCGG AGTCTTTGGC AGCACCCGAG CAGATCCGTC CATTGCCCTC GCTGGAGCAA
GTCAGCTTCA AGGCCTTGGA GGCGCGCGCC CGGATGAACA ATCCGCTGCT GCGCACGGAA
GAGTCCCAGA TCAGGGCTGC CGAGAAGAAC CGGGAGTTGA CCTACAAGAA CCGTTACCCC
GACTTCAATG TCGGTATCTC TCCAATTCAG TACCGAGGGT CGTTCAAAGA GTGGGAATTG
ATGGTCGAGA TGAACATTCC CCTGCAACAA GACTCGCGGC GCGCCCAGGA GCGGGAGTCC
GAGGCCATGT TGGCCGCTGC ACGCTCACGC CAGGAAATTG TCACGAATCA AATCCTGGCA
GACCTGTACG CCAACGTGGC AGGTTTTGAG TCTGCCCGGC GTTCTCTGAC GTTAACGACG
GACAGCCTCT TGCCGCAATC CGAGTTGACC TTCCGCTCGG CGCTGGCCGG ATATCAGACG
GGCAAGGTGG ATTTTGCAAC CTTGCTGGAT GCGCAGCGCC AGATTCGCCA AACCAAATTG
AATCAGATCA AAGCCGAATT AGACGGACAG AAGCGGCTTG CCAACATTGA AAGCATCGTG
GGAGAAGAGC AATGA
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| Protein sequence | MMPMRSRLSL GLVMVSLALS PMVYAQEFKL GSNVEGLLQA ARERNPEIAG MRFDAEAAAE
RVVPAGALPD PKFRTELRDI TRMGEQNPTL LPGRVGSTRY LLMQDLPWMG KRGLKREVAE
SQAEAARNRA TGTWVELAGK IKTTYAELYY LDQNERLSRE ILDLMAQLEK VAQVRYAGGL
AAQQDVIRAQ VEQSTMRNEL IALDAERRQL QSRLNALLGR PTSESLAAPE QIRPLPSLEQ
VSFKALEARA RMNNPLLRTE ESQIRAAEKN RELTYKNRYP DFNVGISPIQ YRGSFKEWEL
MVEMNIPLQQ DSRRAQERES EAMLAAARSR QEIVTNQILA DLYANVAGFE SARRSLTLTT
DSLLPQSELT FRSALAGYQT GKVDFATLLD AQRQIRQTKL NQIKAELDGQ KRLANIESIV
GEEQ
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