| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2704 |
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| Symbol | |
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| ID | 4671806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2870183 |
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| End bp | 2871799 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639839761 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_986925 |
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| Protein GI | 121595029 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.534684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAG GTTTCAAGGC AGGCGTACTC CTGGCTATCG TCGCCGCGGG GTTGGCGGCG
GGCGGTGGCT ATTGGGTGGG GCAGCGCCAA TCCGAAGCCC ACAGCGGTGA CCAGACTGCG
TCGCCCGGCG CTTCTGCCGT TGCCGCCAAG AAGGAGCGGA AGGTACTTTT CTACCGTAAC
CCGATGGGGC TGCCCGACAC ATCCCCCACA CCGAAAAAAG ATCCGATGGG GATGGATTAC
ATCCCGGTCT ACGAGGGGGA GCAGGAAGAA GCAGAAACCA ATTCCAACCA AATCCGCATC
AGTACTGAAA AGATTCAGAA ACTCGGCGTT CGCACCGAGG CGGTCAGTCT GCGTTCACTG
GACAAGGTGG TACGTGCCGC CGGCCGTATC GAACCAGACG AGCGCCAGAC CTTCACCATC
GCTGCCAAAT TTGAGGGCTA TGTCGAGCGT CTGCATGTCA ACGTCACAGG ACAGGCGGTG
AGCAAAGGAC AGCCGCTGTT CGAGGTCTAT AGCCCCGAAC TGGTGTCTGC TCAGCGTGAA
TACGCCATCG CGGCACAGGG TGTCGATGCG TTGAAGGGCG CCTCCGGCGA GGCACAGCGT
GGCATGCGTG AGCTCGCCGA CTCCAGCCTG GCGCGGCTTC GCAATTGGGA CATCTCGGAC
GAGCAAGTCA AGGCCCTGGC CAAATCCGGC GAATCACGCC GTACTCTGAC ATTCCGCTCA
CCGGTGACAG GGATCATCAC GGACAAGAAG GCCGTCCAAG GCATGCGCTT CATGCCGGGC
GACATGCTCT ACCAGGTTGC GAACCTGTCC TCGGTCTGGG TCATCGCGGA TGTCTTCGAG
CAAGACATCG GATTGGTCAA GTTGGGGGGG AAAGCCAAGG TGCAAATCAA TGCCTACCCA
GACAAGGTGT TCCAGGGGAC GGTTAGCTAT GTGTACCCCA CCCTGAAGCC TGAAACCCGA
ACGGTGCAGG TGCGCGTCGA TTTGTCGAAC ACGGGTGGCC TGCTCAAGCC GGGTATGTTT
GCCCAGGTGG AACTGCCGAC CGCCAGCAAG GGTTCGGTTT TGACTGTGCC GACTTCGGCC
GTGATTGACA GCGGCACGCG CCAGATCGTC CTGGTGCAGC TCAAGGAAGG CCGATTCGAA
CCCCGCGATG TCAAAGTAGG TGCACGCAGC GACGACCGCA TTGAAGTCAT CGAGGGCGTG
CGCGAGGGAG AGCAGGTGGT CATCGCTGCC AATTTCCTGA TCGATGCGGA AAGCAACCTC
AAGGCGGCCG TGGGCGGCTT TGGGCACTCT TCACATGGAG CTAAGCCGGA CGCACAAGGC
ACCCCAGATG CGGGTAAGCC TGCTGCTGCC TCCGTCGGGC ATCGGGGTGA GGGCAAGGTG
GAGGAGTTGG ACACCAAGAA TGGCACGGTA ACCATTGCCC ATGGCCCCAT ACCTACTCTC
AAATGGCCAG CGATGTCTAT GGAGTTCAAG GTCTCCAACA GCGGGTTGCT GGCGGACATG
AAGCCTGGCG CATTGGTCGC CTTCGAGTTC GTGGAGCGCG GACAGGGTGA ATGGGTGATC
ACCTCCGTGA AACCCGTGGG CAATGCGGCG GCCAATCCGC ACGCCGGCCA TAACTGA
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| Protein sequence | MTTGFKAGVL LAIVAAGLAA GGGYWVGQRQ SEAHSGDQTA SPGASAVAAK KERKVLFYRN
PMGLPDTSPT PKKDPMGMDY IPVYEGEQEE AETNSNQIRI STEKIQKLGV RTEAVSLRSL
DKVVRAAGRI EPDERQTFTI AAKFEGYVER LHVNVTGQAV SKGQPLFEVY SPELVSAQRE
YAIAAQGVDA LKGASGEAQR GMRELADSSL ARLRNWDISD EQVKALAKSG ESRRTLTFRS
PVTGIITDKK AVQGMRFMPG DMLYQVANLS SVWVIADVFE QDIGLVKLGG KAKVQINAYP
DKVFQGTVSY VYPTLKPETR TVQVRVDLSN TGGLLKPGMF AQVELPTASK GSVLTVPTSA
VIDSGTRQIV LVQLKEGRFE PRDVKVGARS DDRIEVIEGV REGEQVVIAA NFLIDAESNL
KAAVGGFGHS SHGAKPDAQG TPDAGKPAAA SVGHRGEGKV EELDTKNGTV TIAHGPIPTL
KWPAMSMEFK VSNSGLLADM KPGALVAFEF VERGQGEWVI TSVKPVGNAA ANPHAGHN
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