Gene Ajs_2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2688 
Symbol 
ID4671158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2850895 
End bp2852070 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content70% 
IMG OID639839745 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_986909 
Protein GI121595013 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.383027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACCTTGTACG CCGCCCCTCC GCGCTGCGGC GGCTCTGGCT CCTGCTGGCC 
CAGGCAATCG CGATTGGCGC GGGTGTCATC ATTGCTTGGC GGGCCTTCGG GCCGGCGCCT
GTCCCTGTGA CGCCCGACGT CGTGGCGGTA CAGGAGGCGC CGCATGCGGG CGCCACTACC
GGCTCGGCGC CTGCCACACC GAGCGCGATC ACAGCCCGCC TGGAGGCGGG GTTTCGCGCC
GCCGCCGCCA AGGCGTCCGC TTCGGTTGTG AACATCTACA CCCGCAAGAC ACCTCCGCGC
AGGATGCAGA ACTGGTTGCG GCCCGATGGC GGCGATGAGG ACGCCGCCCA AGGCGCGTCG
AGTCTTGGGT CAGGCGTCAT CGTCGCGGCC CAGGGCTATA TCCTCACGAA CAACCATGTC
GTGGAGGGCG CCGACGAGAT CGCCGTGATG CTGCCAGGCG AGAAGGTTGC CACGGCGCGC
GTCGTCGGTA TCGATCCGGA GTCGGACCTT GCCGTGCTGC GCGTCGAGGC CACGGGGCTG
CAGCCCATCA CCTTCGCTGA TCCAGCATCG GTGCAGGTCG GCGACATCGT GTTGGCCGTC
GGCGATCCGT TCGGGGTCGG CCAGACCGTC ACGCAAGGCA TTGTGAGTGC CACGGGGCGC
AACCGCCTGG GCATCAACAC CTTCGAGAAC TTCATCCAGA CCGACGCCGC GATCAACCCC
GGCAATTCGG GCGGCGCGCT CGTCGATGGA AACGGCCATC TCGTCGGCAT CAACACCGCC
ATCTACTCGC GCAGCGGCGG CTCCCAGGGG ATCGGCTTCG CGATCCCGGT CAGCTTGGCA
CGGCAGGTGA TGGAGCAGAT CATTGCCACC GGCCGCGTGC GCCGGGGCTG GCTGGGGGTG
AGCGCCCGCG ACGTGATCCA CGAGGCCACC GGTGCCACCG GGGGCGCCGC ACTGGTGGCG
GTGCAGCGCG GCGGGCCTGC CGATCGCGCC GGGCTGAGGC CCGGTGACAC GGTGCTTGCG
ATCAACGGCA AGGAGATCCC GGACACCGCC GGCCTGATCG GCGAAACAGC CGCGGTCGCA
CCGGGCAGCA ACGCCCAATT CAAGATCCTG CGCGGCCGCG AGACGGTGAC CGTACAAGTC
GAACTCGGGC AGCGGCCCGC GGTCCGCAAG CCCTGA
 
Protein sequence
MSDDLVRRPS ALRRLWLLLA QAIAIGAGVI IAWRAFGPAP VPVTPDVVAV QEAPHAGATT 
GSAPATPSAI TARLEAGFRA AAAKASASVV NIYTRKTPPR RMQNWLRPDG GDEDAAQGAS
SLGSGVIVAA QGYILTNNHV VEGADEIAVM LPGEKVATAR VVGIDPESDL AVLRVEATGL
QPITFADPAS VQVGDIVLAV GDPFGVGQTV TQGIVSATGR NRLGINTFEN FIQTDAAINP
GNSGGALVDG NGHLVGINTA IYSRSGGSQG IGFAIPVSLA RQVMEQIIAT GRVRRGWLGV
SARDVIHEAT GATGGAALVA VQRGGPADRA GLRPGDTVLA INGKEIPDTA GLIGETAAVA
PGSNAQFKIL RGRETVTVQV ELGQRPAVRK P