Gene Ajs_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2620 
Symbol 
ID4674711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2791280 
End bp2793202 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content61% 
IMG OID639839688 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_986853 
Protein GI121594957 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0918982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAT CCATCCGCAA GCACTCCAAG ATCGTCATGT TCTTGTTGTT CTTGCTGATC 
ATCCCGTCGT TCATCCTCGT GGGTATCGAC AGCAACTATT TCAGCGGAGG AAGCCCGGTG
GTAGCGCGGG TCGATGGCAA GGACATCACC CAAGCCGACT GGGACAACGC TCACCGTATG
GAGAGTGATC GAATCCGCGC TCAGTCGCCA GGTATCGACG CCAAGCTGCT GGATTCACCG
CAGGCACGCT ATGCCACGTT GGAGCGGCTG GTGCGTGACC GCGTGCTGCA AGTCGCGGCG
CAGGACATGC ACATGCTGAC CAGCGATGCG CGGTTGGCAC GCGAGCTGCA GAGCATTCCG
CAGATAGCGG CGTTGAAACG AGCTGACGGC ACGCTGGATG CCGAAGCCTA TCGCGCCCTG
GCTGGTGCGC AGGGACTCAC CCCTGAGGGG CTTGAAGCAC GCATCCGGCA GGACTTGTCG
GTCAACCAGG TCATGGGCGG TGTCATGGGT TCAGCATTCA GCGGCCCGGC GGAAGCACGT
TTGGCACTGG ATGCACTGTT CCAGCGCCGT GAAATCCAAA TCGCTCGTTT CAATGCTTCG
GCGTTTGTGT CCAAGGTCGT GGTGACGGAT GCCGACCTGG AGGCCTATTA CACCGCCCAT
CCTGCGAAAT TCCAGCAGGC TGAACAAGCG TCAGTGGAGT ATGTGGTGCT TGACCTTGAT
GCCGTGAAAG CGGGAATCAC GCTCAGCGAA GATGACCTGC GCACCTATTA CAAGGAAAAC
CTGAATCGCC TCGCGGGCAA GGAGGAGCGC CGCGCAAGTC ACATACTGAT CAACGCCAGC
AAGGACGCCC CTGCGGATGC GCGCACCCAG GCCAAGGCCA AGGCGGAGGA ACTGCTCGCG
CAGGTACGCA AAGCGCCGGG CAGCTTCGCG GAGATTGCCA AAAAGGAGTC GCAGGACCCG
GGCTCAGCAC CGTCCGGCGG TGACCTCGGT TTTTTTGGCC GGGGAGCCAT GGTCAAACCC
TTTGAAGACG CCGTTTTTTC CATGAAGAAG GGGGAGATCA GCGACGTAGT GGAAACCGAC
TTCGGCTTCC ACATCATCCT GCTTTCCGAT ATCAAGACTC CGCGCCAGCC TAGTTTCGAG
GAGCTGCGCC CCTCGCTCGA GGCAGAACTC AAGCAGCAAC AGGCCCAACG CAAGTTCGCC
GAAGTGGCCG AGGCGTTTGC CAATGGAGTG TATGAACAGG CGGACAGCCT GCAGCCCGTT
GCCGACAAGC TCAAGCTCAA GATTCAGACG GCCGAGGGGG TTACCCGTAC TCCGGCTGCC
GGCGGCGCGG GGCCGCTTGC CAACGCACGC TTCCTGGAGG CGCTGTTCCA GTCGGACTCG
CTGCAGAACA AGCGCAATAC CGAAGCCATC GAGATCGGTA CAAGTGTGCT GGCAGCCGGC
CGCGTTACGG CATACCAGCC CGCCATGACG CTGCCGCTGG ACAAGGCGCG CGACCAGGTG
CGCGCGATCT ATATCGCCGA GAAGTCCGCT GAACTTGCGC GGCAGGAAGG CCAAGCCAAA
CTGACCGCTT GGAAGGCCGC GCCGGACGCA GCCTCCGGGT TGACTGCTGC GTTGACGGTG
TCGCGGGACC GGCTGCAGGA TCAACCTCGT TCCGTGGTGG ATGCCGCCTT GCGTGCCAAT
GTGGACCAAC TCCCGGCCTG GACAGGTGTG GACCTTGGTG CGCAGGGCTA TGCCGTGGTG
AAAATCAACC GCGTCGTTCC CCGGGACGGT GTGGACGACG CTCGTGCGCG TATGGAGCGA
GAGCAATACT TGCAATCGTG GGCGTCTGCT GAGGCGCTAG CGTATTACGA TTTGCTCAAG
CAGCGTTTCA AGGTCCAGAT CAAGGCCCCC CGACCGGTGG CCCAGGCAGA GCTACAAAAC
TAA
 
Protein sequence
MFESIRKHSK IVMFLLFLLI IPSFILVGID SNYFSGGSPV VARVDGKDIT QADWDNAHRM 
ESDRIRAQSP GIDAKLLDSP QARYATLERL VRDRVLQVAA QDMHMLTSDA RLARELQSIP
QIAALKRADG TLDAEAYRAL AGAQGLTPEG LEARIRQDLS VNQVMGGVMG SAFSGPAEAR
LALDALFQRR EIQIARFNAS AFVSKVVVTD ADLEAYYTAH PAKFQQAEQA SVEYVVLDLD
AVKAGITLSE DDLRTYYKEN LNRLAGKEER RASHILINAS KDAPADARTQ AKAKAEELLA
QVRKAPGSFA EIAKKESQDP GSAPSGGDLG FFGRGAMVKP FEDAVFSMKK GEISDVVETD
FGFHIILLSD IKTPRQPSFE ELRPSLEAEL KQQQAQRKFA EVAEAFANGV YEQADSLQPV
ADKLKLKIQT AEGVTRTPAA GGAGPLANAR FLEALFQSDS LQNKRNTEAI EIGTSVLAAG
RVTAYQPAMT LPLDKARDQV RAIYIAEKSA ELARQEGQAK LTAWKAAPDA ASGLTAALTV
SRDRLQDQPR SVVDAALRAN VDQLPAWTGV DLGAQGYAVV KINRVVPRDG VDDARARMER
EQYLQSWASA EALAYYDLLK QRFKVQIKAP RPVAQAELQN