Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2620 |
Symbol | |
ID | 4674711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2791280 |
End bp | 2793202 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639839688 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_986853 |
Protein GI | 121594957 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0918982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAT CCATCCGCAA GCACTCCAAG ATCGTCATGT TCTTGTTGTT CTTGCTGATC ATCCCGTCGT TCATCCTCGT GGGTATCGAC AGCAACTATT TCAGCGGAGG AAGCCCGGTG GTAGCGCGGG TCGATGGCAA GGACATCACC CAAGCCGACT GGGACAACGC TCACCGTATG GAGAGTGATC GAATCCGCGC TCAGTCGCCA GGTATCGACG CCAAGCTGCT GGATTCACCG CAGGCACGCT ATGCCACGTT GGAGCGGCTG GTGCGTGACC GCGTGCTGCA AGTCGCGGCG CAGGACATGC ACATGCTGAC CAGCGATGCG CGGTTGGCAC GCGAGCTGCA GAGCATTCCG CAGATAGCGG CGTTGAAACG AGCTGACGGC ACGCTGGATG CCGAAGCCTA TCGCGCCCTG GCTGGTGCGC AGGGACTCAC CCCTGAGGGG CTTGAAGCAC GCATCCGGCA GGACTTGTCG GTCAACCAGG TCATGGGCGG TGTCATGGGT TCAGCATTCA GCGGCCCGGC GGAAGCACGT TTGGCACTGG ATGCACTGTT CCAGCGCCGT GAAATCCAAA TCGCTCGTTT CAATGCTTCG GCGTTTGTGT CCAAGGTCGT GGTGACGGAT GCCGACCTGG AGGCCTATTA CACCGCCCAT CCTGCGAAAT TCCAGCAGGC TGAACAAGCG TCAGTGGAGT ATGTGGTGCT TGACCTTGAT GCCGTGAAAG CGGGAATCAC GCTCAGCGAA GATGACCTGC GCACCTATTA CAAGGAAAAC CTGAATCGCC TCGCGGGCAA GGAGGAGCGC CGCGCAAGTC ACATACTGAT CAACGCCAGC AAGGACGCCC CTGCGGATGC GCGCACCCAG GCCAAGGCCA AGGCGGAGGA ACTGCTCGCG CAGGTACGCA AAGCGCCGGG CAGCTTCGCG GAGATTGCCA AAAAGGAGTC GCAGGACCCG GGCTCAGCAC CGTCCGGCGG TGACCTCGGT TTTTTTGGCC GGGGAGCCAT GGTCAAACCC TTTGAAGACG CCGTTTTTTC CATGAAGAAG GGGGAGATCA GCGACGTAGT GGAAACCGAC TTCGGCTTCC ACATCATCCT GCTTTCCGAT ATCAAGACTC CGCGCCAGCC TAGTTTCGAG GAGCTGCGCC CCTCGCTCGA GGCAGAACTC AAGCAGCAAC AGGCCCAACG CAAGTTCGCC GAAGTGGCCG AGGCGTTTGC CAATGGAGTG TATGAACAGG CGGACAGCCT GCAGCCCGTT GCCGACAAGC TCAAGCTCAA GATTCAGACG GCCGAGGGGG TTACCCGTAC TCCGGCTGCC GGCGGCGCGG GGCCGCTTGC CAACGCACGC TTCCTGGAGG CGCTGTTCCA GTCGGACTCG CTGCAGAACA AGCGCAATAC CGAAGCCATC GAGATCGGTA CAAGTGTGCT GGCAGCCGGC CGCGTTACGG CATACCAGCC CGCCATGACG CTGCCGCTGG ACAAGGCGCG CGACCAGGTG CGCGCGATCT ATATCGCCGA GAAGTCCGCT GAACTTGCGC GGCAGGAAGG CCAAGCCAAA CTGACCGCTT GGAAGGCCGC GCCGGACGCA GCCTCCGGGT TGACTGCTGC GTTGACGGTG TCGCGGGACC GGCTGCAGGA TCAACCTCGT TCCGTGGTGG ATGCCGCCTT GCGTGCCAAT GTGGACCAAC TCCCGGCCTG GACAGGTGTG GACCTTGGTG CGCAGGGCTA TGCCGTGGTG AAAATCAACC GCGTCGTTCC CCGGGACGGT GTGGACGACG CTCGTGCGCG TATGGAGCGA GAGCAATACT TGCAATCGTG GGCGTCTGCT GAGGCGCTAG CGTATTACGA TTTGCTCAAG CAGCGTTTCA AGGTCCAGAT CAAGGCCCCC CGACCGGTGG CCCAGGCAGA GCTACAAAAC TAA
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Protein sequence | MFESIRKHSK IVMFLLFLLI IPSFILVGID SNYFSGGSPV VARVDGKDIT QADWDNAHRM ESDRIRAQSP GIDAKLLDSP QARYATLERL VRDRVLQVAA QDMHMLTSDA RLARELQSIP QIAALKRADG TLDAEAYRAL AGAQGLTPEG LEARIRQDLS VNQVMGGVMG SAFSGPAEAR LALDALFQRR EIQIARFNAS AFVSKVVVTD ADLEAYYTAH PAKFQQAEQA SVEYVVLDLD AVKAGITLSE DDLRTYYKEN LNRLAGKEER RASHILINAS KDAPADARTQ AKAKAEELLA QVRKAPGSFA EIAKKESQDP GSAPSGGDLG FFGRGAMVKP FEDAVFSMKK GEISDVVETD FGFHIILLSD IKTPRQPSFE ELRPSLEAEL KQQQAQRKFA EVAEAFANGV YEQADSLQPV ADKLKLKIQT AEGVTRTPAA GGAGPLANAR FLEALFQSDS LQNKRNTEAI EIGTSVLAAG RVTAYQPAMT LPLDKARDQV RAIYIAEKSA ELARQEGQAK LTAWKAAPDA ASGLTAALTV SRDRLQDQPR SVVDAALRAN VDQLPAWTGV DLGAQGYAVV KINRVVPRDG VDDARARMER EQYLQSWASA EALAYYDLLK QRFKVQIKAP RPVAQAELQN
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