Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2618 |
Symbol | |
ID | 4674049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2787465 |
End bp | 2789918 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639839685 |
Product | EcoEI R domain-containing protein |
Protein accession | YP_986851 |
Protein GI | 121594955 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0707543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAA CCAAACTCTC CGAAAGCGAC ATTTGCGAAA AGTTCATCCG GCCGGCCATG GAGCAGGCGG GCTGGGACGG CATGGACCAG ATCTACCGGG AGTACCCGTT GCGCGCGGGC CGTGTGGTGG TGCGCGGCAA GCAGGCCCAG CGCGACAAAA GCACCGTGCT GCGTGCCGAC TACGCCCTGT TCTTCAAGGC CAACATCCCC CTGGCCGTGG TGGAGGCCAA GGACAACCAG CATGCCGTGG GCGCAGGCAT GGGGCAGGCC ATCCAATATG CCGAGCTGCT GGGCGTTCCG TTCAGTTTCG CCAGCAATGG CGATGGCTTC GTGTTCCGTG ATGCCACGCT GGCCGATGGT GTGCTGGAGC GCAACCTGAC TCTGGAGGAA TTTCCGTCAC CTGCCGAGCT GTGGAGTCGC TACTGCGCCT GGAAGGGCTG GTCCGCCGAA GAAAGCCGCA TCGCCGGCTT TGACTACGCC CCCAACAAGA CCCCGCGCTA CTACCAGCTG AACGCCGTGA ACCGCGCTGT CGAGGCCATC GCCGCAGGGC AAGACCGCGT GCTGCTGGTC ATGGCCACCG GCACCGGCAA GACCTACACC GCCTTCCAGA TCATCTGGCG CCTGTGGAAG AGCGGCGCCA AGAAGCGCAT CTTGTTCCTG GCCGACCGCA ACATCCTCAT CGACCAGACC ATGGTCAACG ATTTTCGCCC CTTCAAGGGC GCCATGGCCA AGCTCAGCCC CAATGCCAAG GGCGTGGAGC GTGTCGATGC GCAGGGCGCG GTGTCGGTCG AAGACGTGGA CTTGGCTGTC AACAAAACCA CCAAGCTGGT GGACAAGAGC TACGAGATTT ACTTGTCGCT GTACCAGGCC GTCACCGGCA CCGAGGAAGA GCGCAACATC TACAAGCAGT TCAGCCCCGA CTTTTTCGAC CTGATCGTGG TGGACGAATG CCACCGGGGC AGTGCAGCCG AAGACTCCGC TTGGCGCGAC ATCCTCACCT ACTTTGCCGG CGCCACGCAG ATCGGCCTCA CCGCCACGCC CAAAGAAACC AAGGACGTTT CCAACACCGA CTACTTCGGC GAGCCCGTCT ACACCTACAG CCTCAAGCAA GGCATCGAAG ACGGCTACCT GGCGCCGTAC AAGGTCATCC GCGTCGATCT GGACAAAGAC ACCTTTGGCT GGCGCCCCAC GGCGGGCATG ACCGACAAGC ACGGCCACGC CATCGAAGAC CGCATCTACA CCGGCGCCGA CATGAACCGC AAGCTCGTGC TGGAGCAGCG CGACGCCGTG GTGGCCGCCA AGATCACCGA ATACCTCAAG GCCACCGACC GCTACGCCAA AACCATCGTC TTTTGCGAAG ACATCGACCA CGCCGCTCGC ATGCGCCAGG CGCTCGCCAA CGCCAATGCC GACCTGTGCG CCACCCAGCC CAAATACGTG GTGCAGATCA CCGGCGACAA CACCGAGGGC AAGCTGGAGC TCGACAACTT CATCGACCCC GAGAAAACCT ACCCGGTGAT CGCCACCACC TCCAAGCTCA TGAGCACCGG GGTGGATGCC CAGACCTGCA AGCTCATCGT GCTGGACCAG ACCATCAAGT CCATGACGCT GTTCAAGCAG ATCATCGGCC GTGGCACCCG CCTACGCGAA GACCTGGGCA AGACCTGGTT CACCATCCTC GACTTCAAGC GCGCCACCGA ACTGTTTGCC GATAAGGACT TTGACGGCGA GCCCGTGCAA ATCTACGAAC CCGGCGGTGG TGAACCTGTG GCCCCGCCCG AACCGGCACT GCCTGGCTCC ACTCCTGGCG ACCCAGGTGC GCCAGACCCT CTGGATCCTT TGAGCACTTT AGGCCCCTTT GCTGGCGGCA GTGGCGAATC AGATGGCCCC AAAAAATACG TCCTCGGCAA CAACGTCACC GTGGCCGTGG CCCGCGAGCG CGTGCAGTAC CTCAACGCCG AAGGCAAGCT CATCACCGAG AGCCTGCGCG ACTACACCCG CATCAACGTG CGTAAGCAAT ACGAGTCGCT CGACCAGTTC CTGCAAGCCT GGCAACAGGC CGACCGCAAG GCCGCCCTGC TGCAAGAACT GGAAGCGCAG GGCGTGCTGC TCGATGCGCT GGCCGACGAG GTTGGCAAAG ACCTCGACCC CTTCGACCTG CTGCTGCACG TCGCCTACGA CCAGCCCCCG CTCACCCGCC GCGAACGCGC ACGCCGTGTG CAAAAGCGCA ATGTCTTCAC CCAATACGGC CCCGTGGCCC GCAAGGTGCT GGAGGCATTG CTCGACAAAT ACGCGGACGA AGGCATCACC ACCATCGAGA GCAACGAAGT CTTCAAGCTC CAACCCTTCA CCGACCTGGG CAGCCCCGTG GAGCTGGTGC GCAGCTTTGG CGGCCGCCCG CAGTACCTGA GCGCGCTGCA AACCCTGGAG CGCGAGCTGT ACGCTCCTCG CTGA
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Protein sequence | MDKTKLSESD ICEKFIRPAM EQAGWDGMDQ IYREYPLRAG RVVVRGKQAQ RDKSTVLRAD YALFFKANIP LAVVEAKDNQ HAVGAGMGQA IQYAELLGVP FSFASNGDGF VFRDATLADG VLERNLTLEE FPSPAELWSR YCAWKGWSAE ESRIAGFDYA PNKTPRYYQL NAVNRAVEAI AAGQDRVLLV MATGTGKTYT AFQIIWRLWK SGAKKRILFL ADRNILIDQT MVNDFRPFKG AMAKLSPNAK GVERVDAQGA VSVEDVDLAV NKTTKLVDKS YEIYLSLYQA VTGTEEERNI YKQFSPDFFD LIVVDECHRG SAAEDSAWRD ILTYFAGATQ IGLTATPKET KDVSNTDYFG EPVYTYSLKQ GIEDGYLAPY KVIRVDLDKD TFGWRPTAGM TDKHGHAIED RIYTGADMNR KLVLEQRDAV VAAKITEYLK ATDRYAKTIV FCEDIDHAAR MRQALANANA DLCATQPKYV VQITGDNTEG KLELDNFIDP EKTYPVIATT SKLMSTGVDA QTCKLIVLDQ TIKSMTLFKQ IIGRGTRLRE DLGKTWFTIL DFKRATELFA DKDFDGEPVQ IYEPGGGEPV APPEPALPGS TPGDPGAPDP LDPLSTLGPF AGGSGESDGP KKYVLGNNVT VAVARERVQY LNAEGKLITE SLRDYTRINV RKQYESLDQF LQAWQQADRK AALLQELEAQ GVLLDALADE VGKDLDPFDL LLHVAYDQPP LTRRERARRV QKRNVFTQYG PVARKVLEAL LDKYADEGIT TIESNEVFKL QPFTDLGSPV ELVRSFGGRP QYLSALQTLE RELYAPR
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