| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2611 |
|---|
| Symbol | |
|---|
| ID | 4674126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2779968 |
|---|
| End bp | 2780519 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639839679 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_986845 |
|---|
| Protein GI | 121594949 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.176576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTATCCC ACCGATCTGG TGAACCCACC TCCCCAGCAC GATTCGCCGT GGCGTCAGGC
TATGTGGCAT GGTGGGCAGG GTTTGTTGGC GCGGCCAGAC ACCGTCACTG CGTCCCAGGC
CGCAACGCCT GCGGCAGAGC CTCTCGATCA GGCTGGCCAG TAGAGCTTGC GCACCTGTCG
CGCAGCGGGA AATCGAAGAC GGCCGAGTCA GCGCTGGAGC AGGCCCTGAT CGCGCGCTTC
GCCACGCTGG GCCGAGTACC CGAGCCGTTC CTGCTGCGTT CGGACAATGG GTTGGTCTTC
ACCAGCCGCA GCTTCACGGC CCTGGGAAGC TGCGGACTGC GTCAAGAATT CATCACGCCG
CACAGCCCTG AGCAGAACGG TCTGGTCGAG CGGGTGATCC GCACGCTCAA GTGCGTGCAT
CGGCATCGCT TCGACTCGCT GCAGCATGCC AGTCGCCTGA TCGGGGACTG GATCCATTTC
TACAACCACC GGCGCCCGCA CCAGGCGCTG AACGTGAGAA CCCCCGCTGA GGCATTCGCA
TTAGCGGCAT GA
|
|---|
| Protein sequence | MVSHRSGEPT SPARFAVASG YVAWWAGFVG AARHRHCVPG RNACGRASRS GWPVELAHLS
RSGKSKTAES ALEQALIARF ATLGRVPEPF LLRSDNGLVF TSRSFTALGS CGLRQEFITP
HSPEQNGLVE RVIRTLKCVH RHRFDSLQHA SRLIGDWIHF YNHRRPHQAL NVRTPAEAFA
LAA
|
|---|
| |