Gene Ajs_2608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2608 
Symbol 
ID4674139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2773896 
End bp2775635 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content60% 
IMG OID639839675 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_986842 
Protein GI121594946 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.234433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.107182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCATG CGCCGATAAT CCGCGTTTGT GCCCAAAAAA TTTTGGCGCC TTCTTCTGCC 
CGTTTCCTGA ATAAATCCAT GGCCCAATAC GTTTTCTCGA TGAACCACGT CACCAAGACC
GTGCCGCCCA AGCGGCAGAT CTTGAAGGAC ATTTCCCTTA GCTTCTTTCC GGGCGCCAAG
ATCGGCGTGC TGGGCCTGAA CGGCTCCGGC AAGTCCTCTT TGCTCAAGAT CATGGCGGGC
GTGGACAAGG AATTCGAAGG CGAGGCACTG CCCATGCCCG GGCTGTCGAT CGGCTACCTG
CCCCAGGAGC CCCAACTCAA TCCCGAGCAC ACCGTGCGCC AGGCCGTGGA AGAAGCCATG
GCCGAGGTGA ACAACGCCAA AGCCCGCCTG GAAGAGGTAT ACGCTGCCTA CGCGGAAGAG
AATGCCGACT TTGACGCGCT GGCCAAAGAA CAGGGTGAAT TGGAGGCCAT CATCGCCGCG
GCCGGTACCG ATTCCGAACA CCAGTTGGAA ATTGCGGCCG ACGCGCTGCG TCTGCCGGCG
TGGGATGCGG TGATTGGCAA GCTATCGGGT GGCGAAAAGC GTCGCGTGGC CCTGTGCAAG
CTGCTGCTGT CCAAGCCCGA CATGCTGCTG CTGGACGAAC CCACCAACCA CTTGGACGCC
GAATCCGTGG ACTGGCTGGA GCAATTCCTG CACCGCTTCA GCGGTACCGT GGTGGCGATC
ACCCACGACC GCTACTTCCT GGACAACGCC GCTGAGTGGA TTCTGGAACT GGACCGAGGC
CACGGCATCC CCTACAAGGG CAACTACTCT GACTGGCTGA TCCAGAAGGG CAACCGTCTG
GAAGCCGAGC AAAAAGGCGA GGAGGCTCGC GCCAAGGCTT TGAAGAAGGA ACTGGAGTGG
GTGCGCCAGA ACGCCAAGGG CCGCCAGGCC AAGTCCAAGG CGCGTATTGC CCGCTTCGAA
GAGCTGAGCG ATTACGAATA CCAGCGCCGC AACGAAACGC AGGAGATCTT CATTCCTGTA
GCGGATCGCC TGGGCTCTAA GGTCATCGAA TTCAAGAATG TCTCCAAGGC CTTTGGTGAC
CGCCTGCTGA TCGACAACCT GAGCATGAAC ATCCCTGCCG GCGCCATCGT CGGCATCATC
GGCCCGAACG GTGCCGGCAA GTCGACCCTG TTCAAGCTGA TCGCGGGCAA GGAGCAACCT
GATTCCGGTA CCGTGGAAAT CGGTCAGACC GTGAAGATGG CCTTTGTCGA TCAGCACCGC
GACGCACTGG CCGATGACAA GACCGTGTGG GAGGACATCT CCGGCGGGCT GGACATCATC
AACGTGGGCA AGTTCCAAAT GGCGTCGCGC GCCTATGCCG GGCGCTTCAA CTTCAACGGC
CAGGACCAGC AGAAGAAGGT GGGCAACCTG TCCGGGGGCG AGCGCGGCCG CCTGCACCTG
GCCAAGACGC TGATCCAGGG CGGCAACGTG CTGCTGCTGG ACGAACCGTC CAACGACCTG
GACGTGGAAA CCCTGCGTGC GCTGGAAGAC GCGTTGCTGG AATACGCTGG CACCGTGCTG
GTCATCAGCC ACGATCGTTG GTTCCTCGAC CGTATCGCGA CGCACATCCT GGCCGCCGAG
GGCGACAGCC AATGGGTATT CTTTGACGGC AATTACCAAG AATACGAAGC TGATAAGAAA
AAACGATTGG GTGAAGAGGG TGCGAAACCG AAGCGTATGC GCTACAAGGC CCTCAAATAA
 
Protein sequence
MSHAPIIRVC AQKILAPSSA RFLNKSMAQY VFSMNHVTKT VPPKRQILKD ISLSFFPGAK 
IGVLGLNGSG KSSLLKIMAG VDKEFEGEAL PMPGLSIGYL PQEPQLNPEH TVRQAVEEAM
AEVNNAKARL EEVYAAYAEE NADFDALAKE QGELEAIIAA AGTDSEHQLE IAADALRLPA
WDAVIGKLSG GEKRRVALCK LLLSKPDMLL LDEPTNHLDA ESVDWLEQFL HRFSGTVVAI
THDRYFLDNA AEWILELDRG HGIPYKGNYS DWLIQKGNRL EAEQKGEEAR AKALKKELEW
VRQNAKGRQA KSKARIARFE ELSDYEYQRR NETQEIFIPV ADRLGSKVIE FKNVSKAFGD
RLLIDNLSMN IPAGAIVGII GPNGAGKSTL FKLIAGKEQP DSGTVEIGQT VKMAFVDQHR
DALADDKTVW EDISGGLDII NVGKFQMASR AYAGRFNFNG QDQQKKVGNL SGGERGRLHL
AKTLIQGGNV LLLDEPSNDL DVETLRALED ALLEYAGTVL VISHDRWFLD RIATHILAAE
GDSQWVFFDG NYQEYEADKK KRLGEEGAKP KRMRYKALK