| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2606 |
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| Symbol | |
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| ID | 4673973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2770246 |
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| End bp | 2771583 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839673 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_986840 |
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| Protein GI | 121594944 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.909099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.286368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGA TGTCACGCCG CCTGCGCATG GCGCTGCTGT CGCTGCGCGA CCTGTTGGTG
TCTGCCGGGC CGCTGGCGCT ACTGGGCGCG GGCCTGGTGC TACTGGCCTA TTGGTGGCTC
AACCCCACGC CGCCGCGCAC GGTGACGCTG GCCACCGGCC CCGCGCAGAG CGCCTACGAG
GCCTTCGGCC AGCGCTATCG CGACGCACTG GCGGCAAGCG GGATCAACGT GGTCTTGCTG
CCCAGCGATG GCTCGTCATC CAACCTGCAG TTGCTGCGCG ATGGCCACGC CGACCTCGCC
TTCGTGCAAG GTGGCACGGG TGAGTTGCGT CCCGAGGACA GTGATGAGCT GGTCTCGCTG
GGCAGCCTCT TCGTGGAGCC CATCTGGCTG TTCTACCGCG GCGATGTGGC GCGCCGCATC
CACCGATCGG CCCGGCTGGA GGGGCTGCAC CAGCTGCGCG GGCTGCGCGT GAACGTCGGC
TCGCCCGGCA GCGGCGTGCC AACGCTCATG GAGCGCCTGC TGGACGCCAA CCACATTCCG
CTGGATGCCC TCACGCTCAC CCGTCTGGAG CAGACGCCCG CCACGGTGGC GTTCCTGGCG
GGGCGGTTGG ACGCCCTGGT GTTTGCCTCC GCCCCCGAGT CATTGATGGT GCAGATGCTG
CTGCAAACGC CCGGCGTGCA GCTCATGCAC TTCCCGCAAA ACGAGGCCTA CAGCCGCCGT
TTTCCGTTCC TCACGCCGGT AGTGCTGCCA CGCGGCGTGG TGGACCTGGC GGCCAACGTA
CCCCCGCGCG ACGTACGGTT GGTGGCATCC ACCACATCCC TGCTGGCGCG TGAAGGCACC
CACCCCGCCC TGCTGCAATT ATTTGCCCAG AGCGCGCAGG GCATCCATGG CAATGCGGGC
TGGTTCAACC GTGCGCGCGA ATTCCCCAGC ACCCGGCACG CGGAACTGCC CATTGCCAAG
GAGGGCGAGC GCGCCATCAA CGAGCCGGCG CCGCTGATGC AGCGCTATCT GCCATTCTGG
ATCGCCAACC TCGTCGAGCG CATGTGGCTG GTACTGGGTA TCTTGATTGC CGTCATGCTG
CCGCTGTCGC GCGTGGTGCC GCCGCTGTAC CAGTTCCGCG TGCGCTCGCG CGTGTTCCGC
TGGTATGGGC ATCTGCGCGA CATCGAAGAC GACATGGAAC GAGGAGAGGC CACCCCCGAC
GCGCTGCGCG AACGGCTGGA CCGCATGGAG GCGCAGGTGG AAAAAGTGAG CGTGCCACTG
TCCTATGCCG ACGAGCTCTA CGCCCTGCGC AACCACATCC AACTGGTGCG CCGGCGCCTG
CCACGCGCGG CAGGCTGA
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| Protein sequence | MGQMSRRLRM ALLSLRDLLV SAGPLALLGA GLVLLAYWWL NPTPPRTVTL ATGPAQSAYE
AFGQRYRDAL AASGINVVLL PSDGSSSNLQ LLRDGHADLA FVQGGTGELR PEDSDELVSL
GSLFVEPIWL FYRGDVARRI HRSARLEGLH QLRGLRVNVG SPGSGVPTLM ERLLDANHIP
LDALTLTRLE QTPATVAFLA GRLDALVFAS APESLMVQML LQTPGVQLMH FPQNEAYSRR
FPFLTPVVLP RGVVDLAANV PPRDVRLVAS TTSLLAREGT HPALLQLFAQ SAQGIHGNAG
WFNRAREFPS TRHAELPIAK EGERAINEPA PLMQRYLPFW IANLVERMWL VLGILIAVML
PLSRVVPPLY QFRVRSRVFR WYGHLRDIED DMERGEATPD ALRERLDRME AQVEKVSVPL
SYADELYALR NHIQLVRRRL PRAAG
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