| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2586 |
|---|
| Symbol | |
|---|
| ID | 4672960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2750506 |
|---|
| End bp | 2751852 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639839653 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_986820 |
|---|
| Protein GI | 121594924 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.182756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.110862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCTG ACCTCGTCTC CACCCGCAGC CACGTAGCTG CCGGGCATAG CAGCGCACGC
GATGAAATCG AGCGCTGCAT CGCCGCCGCC GAAGGGCCCA CCTGCGCCCA TGTGTTCCGC
CAGACCAGCT TCGACCAGGC CCGCGCAGCA GCCGCCGTGC CCGGCGTGGA GCGTCTGCCG
CTGGCGGGCC TTGCCGTGTC GGTCAAGGAT CTGTTCGACA TCCAGGGCAT GACCACCGCC
GCGGGCTCCA CCGTGTTGCG GGATGCGCCA CCCGCGCCGG CCGACAGCCC GGCCGTGGCG
CGCCTGCGCC GCGCGGGCGC AGCGTTCATC GGCCGCACGC ACATGGTGGA GTTCGCCTTC
TCCGGCGTGG GTGTGAATCC GCACTTTGGC ACGCCCGCCG CATTTGACGC CCGCCACGGC
GCGCTGCCCG GCCCCGCGCG GGTGTGCGGG GGCTCATCGT CGGGCGCCGG GGTGTCGGTG
GCCACGGGCG CGGCCTTCAT TGGCCTGGGC TCCGACACGG GCGGCTCGAT CCGTATCCCG
GCCGCGCTGA ACGGCATCGT GGGCTTCAAG AACACCGCGC GTCTCGTGCC CACCGAAGGC
GCTGTCCCCT TGTCCACCAC GCTGGACACG GCCTGCGCAC TCACCCGCAC GGTGCGCGAT
GCCGTCGTGG CGCACGAGAT CCTGGCGGCA CGGCGCGTCA CGCGCAGCCC CGCACCGCTG
TCGGCCTGGC GGCTGGCCGT ACCCGCCACA CTGTTCCTGG ACGGACTGGA CGCCACCGTG
GTCCGCGCCT TCGACCGCAC GCTGTCCCGC CTGCGCGCGG CCGGCGCGCA GATCACCGAG
ATTGCCCTGG CAGAAACCGC CCAGTTGGCC GATGTGAACG CCACCGGCGG GTTTTCCGCC
GCCGAAAGCT ACGCCTGGCA CCGCACGCTG CTGGCACGGC ACGGCAACGC CTACGATCCG
CGCGTGAAGA GCCGCATCGA GCGCGGCGCT GGCATGTCCG CGGCCGACTA CATCGATCTG
CTGCACGCGC GGCGCGCCTG GATCGCACGC ATGCAGACCG CCATAGCCGG CTTCGACGCC
CTGCTCTCGC CCACCGTGCC CATCGTGGCG CCCCCCATCG CATCGGTCGC GCCGGGCAGC
GAGCGCGACG CGGAGTTCTT TCGCGTCAAC GGATTGCTGC TGCGCAACAC CAGCGTGGTC
AACATGCTGG ACGGCTGCGC CCTGTCCCTG CCCTGCCACG AAGCGGGCGA ACTGCCCGTG
GGCCTGATGG TGTGGCACGG CGCACTGCGC GACGACCCGG TGCTGAACAT CGGCCTGCTG
ATCGAACAAG AACTACAAAA ACAATAG
|
|---|
| Protein sequence | MLADLVSTRS HVAAGHSSAR DEIERCIAAA EGPTCAHVFR QTSFDQARAA AAVPGVERLP
LAGLAVSVKD LFDIQGMTTA AGSTVLRDAP PAPADSPAVA RLRRAGAAFI GRTHMVEFAF
SGVGVNPHFG TPAAFDARHG ALPGPARVCG GSSSGAGVSV ATGAAFIGLG SDTGGSIRIP
AALNGIVGFK NTARLVPTEG AVPLSTTLDT ACALTRTVRD AVVAHEILAA RRVTRSPAPL
SAWRLAVPAT LFLDGLDATV VRAFDRTLSR LRAAGAQITE IALAETAQLA DVNATGGFSA
AESYAWHRTL LARHGNAYDP RVKSRIERGA GMSAADYIDL LHARRAWIAR MQTAIAGFDA
LLSPTVPIVA PPIASVAPGS ERDAEFFRVN GLLLRNTSVV NMLDGCALSL PCHEAGELPV
GLMVWHGALR DDPVLNIGLL IEQELQKQ
|
|---|
| |