Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2579 |
Symbol | |
ID | 4674085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2744337 |
End bp | 2745509 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639839646 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_986813 |
Protein GI | 121594917 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.217024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0427176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC GTCTCACGGT GCTGGGTTCT ACGGGATCCA TCGGCACCAG CACCCTCGAC GTGGTGGCAC TCCACCCCGA TCGCTACGAA GTCTTTGCGC TGAGCGCGGC CACGCAGGTG GACCTGATGC TGGCGCAGTG CGCGCAGTTC CGTCCGCGCT ATGCGGTGAT GGCCAGCAGT GCGCATGCGC GCCAGCTGGC AGACAAACTG CAGCAGAGCG GCTTGCCCAC CGAGGTGCTG CAAACACCCG ATGCGCTGCA AGCCATTGCC TCGCACGAAG AGGTGGACGC GGTCATGGCG GCCATCGTGG GCGCGGCGGG CCTGGCGCCG TGCCTGGCGG CCGCGCGTGC GGGCAAGCGC CTGCTGCTGG CCAACAAGGA GGCGCTGGTC GTCGGGGGCG AGGTGTTCAT GGCCGCGGTG CGCGAAGGCG GCGCCACGCT GCTGCCCATC GACAGCGAGC ATTCCGCCAT CTTCCAGAGC CTGCCCGAAG ACCCCGCCAC CTGGCCGCGG CGCGTGGACC ACGTGCTGCT CACCGCGTCG GGCGGGCCGT TTCGCACGCG CGACCCGGCC ACGCTGCGCG ACGTGACGCC GGCGCAGGCC TGCGCGCATC CCAACTTCTC GATGGGCCGC AAGATTTCCA TCGACTCGGC CACGATGATG AACAAGGCGC TGGAGGTGAT CGAGGCGCGC TGGCTGTTCA ACCTGGCGCC CGAGCAGATC AAGGTGGTCA TCCACCCGCA GCAGATCATC CACTCCATGG TGCAGTTTGT GGACGCGTCC ATCATTGCCC AGTTGGGCAC GCCCGATATG CGCGTGCCCA TCGCCTGTGG CCTGGCCTGG CCCGAGCGGG TGGAAAGCGG CGCGGCACCC CTGGATTTCA CGCAACTGGC GGCGCTGACC TTCGAAGAAG CGGATGCCAC GCGCTTTCCT GGCCTGCACC TGTCCTGGCA GGCGTTGCGC GCGGCGCCCG GCACCACGGC CGTGCTCAAT GCCGCCAACG AGGTGGCAGT GGCGGCTTTC CTGGAGCAGC GCATACGTTT CGACCAGATC CATGCGCTCA ACCTTGCAAC TTTGGAAGCC GTCGAACCGT CCAACCCGGA CTCGCTGGAT GCACTGCTGG CGCTGGATGC GCGCACGCGT GCGCGGTCCG CGGAACTGAT GGCGCGCTTG TGA
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Protein sequence | MKQRLTVLGS TGSIGTSTLD VVALHPDRYE VFALSAATQV DLMLAQCAQF RPRYAVMASS AHARQLADKL QQSGLPTEVL QTPDALQAIA SHEEVDAVMA AIVGAAGLAP CLAAARAGKR LLLANKEALV VGGEVFMAAV REGGATLLPI DSEHSAIFQS LPEDPATWPR RVDHVLLTAS GGPFRTRDPA TLRDVTPAQA CAHPNFSMGR KISIDSATMM NKALEVIEAR WLFNLAPEQI KVVIHPQQII HSMVQFVDAS IIAQLGTPDM RVPIACGLAW PERVESGAAP LDFTQLAALT FEEADATRFP GLHLSWQALR AAPGTTAVLN AANEVAVAAF LEQRIRFDQI HALNLATLEA VEPSNPDSLD ALLALDARTR ARSAELMARL
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