| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2577 |
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| Symbol | |
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| ID | 4674350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2740510 |
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| End bp | 2742807 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639839644 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_986811 |
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| Protein GI | 121594915 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.489897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.089041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC ATATCAATCG CCTGGGCGTG CGTACGGCAT CCGCCCTCGC AGCCATGGTT
TTTGCCTCCC AAGCCGCATG GGCGCTGGCG CCGTTCAAGG TGCAGGACAT CCGTGTGGAA
GGCCTGCAAC GTGTGGAGCC GGGCACCATC TTCGCGTCGT TGCCGCTGCG CGTGGGTGAC
GAGTACAACG ACGACAAGGG TGCAGCAGCC ATCCGCGCGC TGTTTGCCCT TGGCCTGTTC
AAGGACGTGC GCCTGGAGGC TTCCGGCAAC GTGCTGGTGG TGGTGGTGGA AGAGCGCCCG
ACCATCGCCG ACGTGGATTT CGCCGGCACC AAGGAGTTCG ACAAGGACAC CCTCAAGAAG
GCCATGCGCG ACGTGGGTTT GACCGAGGGG CGCCCCTTCG ACAAGGCCCT GGCCGACCGC
GCCGAGCAGG AACTCAAGCG CCAGTACATC AACCGCAGCC TGTACGGCGC GGAGGTGGTG
ACCACCGTCA CGCCGATCGA GCGCAACCGC GTCAACCTCA CCTTCACCGT CACCGAGGGC
GAGCCCGCCA AGATCAAGGA AATCCGCATC GTCGGCAACA AGGCCTTCAG CGAATCCACG
CTCAAGGGGC TGTTCGACCA GGACACGGGC GGCTGGATGA GCTGGTACAC CAAATCCAAC
CGCTATTCGC GCGCCAAGCT CAATGCAGAC CTGGAGACGC TGCGCTCGTA CTATCTGGCG
CGCGGCTTCC TGGAGTTCCG CATCGAGTCC ACGCAGGTGG CAATCTCGCC CGACAAGCAG
GACATCTCGA TCACCGTCAA CGTGAACGAA GGCCAGAGCT ATGTGGTTTC AGGAGTGAAG
TTGGAAGGCA ACTACCTGGA CCGCGATGAC GAGTTCAAGT CGCTCATCAC CATCCGCCCT
GGCGAGCCCT ACAACGCCGA CAAGGTGGCC GAAACCACCA AGGCTTTCAC TGACCACTTC
GGGAACTTCG GCTTCGCCTT CGCGCGTGTG GAGGCCGTGC CCGAGATCGA CCGCGAGAAC
AACCGCGTGG CCCTGGTGCT GCGTGCAGAG CCCTCGCGCC GCGCCTATGT GCGCCGGATC
AACGTGAGCG GCAACAACCG CACCCGCGAC GAAGTCATCC GCCGCGAATT CCGCCAGTTT
GAAGCCTCCT GGTACGACGG CGACAAGATC AAGCTGTCGC GCGACCGCGT GGACCGCCTG
GGCTATTTCA CTGAGGTGAA TGTGGAAACC CAGGAGGTGC CGGGCGCGCC CGACCAGGTG
GACCTGGTGG TGAACGTGGC CGAGAAGCCT ACGGGATCGC TGCAACTGGG GGCGGGCTTT
TCCAGCGCCG AGAAGGTCTC GGTGTCGTTT GCCATCAAGC AGGAGAACGT CTTCGGTTCA
GGCAACTACC TTGGCGTGGA CGTCAATACC AGCAAGTACC GTCGCACGCT GGTGTTCTCC
ACCACCGATC CGTACTTCAC GCAGGATGGC ATCTCCCGTA CCTTCGACGT GTACTACCGC
ACGGCCAAGC CCTACGAAGA CCAGGGCGGC AACTATGAGC TGGTCACCGC GGGCACCAGT
GTGCGCTTGG GCATACCCTT CAGCGAGACC GACACCGTGT TCTTCGGGGG GGGAGTGGAG
CAGACGCGCA TCAAGGCCGG TACCAATATC CCCGCCGCCT ACCTCGCCTA TGCGCAGCAG
TTTGGTGAAA CCAGCCTATC CGTGCCGCTC ACCATTGGCT GGTCGCGCGA TGACCGTGAC
AGTGCGTTGG CACCGAACTC CGGGCGGTAC CAGCGCCTGA ACTCCGAATG GTCCGTGGCC
GGCGATGCGC GCTATGTGCG AGCCAACTAC CAATACCAGC AGTACATTCC CTTGAACAAG
CAGTTCACCA TTGCCTTCAA CGGCGAGTTG GGCTTAGGCA AGGGCATGAA TGGCCGTCCC
TTCCCGGTGT TCAAGAATTT TTACTCCGGC GGCCTGGGCT CGGTGCGCGG CTTCGATCAG
GGCACACTGG GTCCGCGGGA CGTGACCGGT GCGTCGCTGG GCGGCCCCAA GAAGATCACG
CTGAATGCCG AGCTCATCGC GCCGTTCCCC GGCGCCGGCA ACGACCGCAC GCTGCGCTGG
TTCACTTTCG TGGACGCGGG CAACGTGTAC GGCGAGGATG AGAGCTGGGA GCTGGGCGAC
ATGCGCGTCT CGGCTGGTCT GGGCCTGAGC TGGATTTCCC CGCTGGGCCC GCTACGTATC
GCCATCGCGC AACCGGTGCG CAAATTCGCC GGCGATAAAA TCCAGAAACT GCAATTCCAG
ATCGGAACGT CTTTCTAA
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| Protein sequence | MRKHINRLGV RTASALAAMV FASQAAWALA PFKVQDIRVE GLQRVEPGTI FASLPLRVGD
EYNDDKGAAA IRALFALGLF KDVRLEASGN VLVVVVEERP TIADVDFAGT KEFDKDTLKK
AMRDVGLTEG RPFDKALADR AEQELKRQYI NRSLYGAEVV TTVTPIERNR VNLTFTVTEG
EPAKIKEIRI VGNKAFSEST LKGLFDQDTG GWMSWYTKSN RYSRAKLNAD LETLRSYYLA
RGFLEFRIES TQVAISPDKQ DISITVNVNE GQSYVVSGVK LEGNYLDRDD EFKSLITIRP
GEPYNADKVA ETTKAFTDHF GNFGFAFARV EAVPEIDREN NRVALVLRAE PSRRAYVRRI
NVSGNNRTRD EVIRREFRQF EASWYDGDKI KLSRDRVDRL GYFTEVNVET QEVPGAPDQV
DLVVNVAEKP TGSLQLGAGF SSAEKVSVSF AIKQENVFGS GNYLGVDVNT SKYRRTLVFS
TTDPYFTQDG ISRTFDVYYR TAKPYEDQGG NYELVTAGTS VRLGIPFSET DTVFFGGGVE
QTRIKAGTNI PAAYLAYAQQ FGETSLSVPL TIGWSRDDRD SALAPNSGRY QRLNSEWSVA
GDARYVRANY QYQQYIPLNK QFTIAFNGEL GLGKGMNGRP FPVFKNFYSG GLGSVRGFDQ
GTLGPRDVTG ASLGGPKKIT LNAELIAPFP GAGNDRTLRW FTFVDAGNVY GEDESWELGD
MRVSAGLGLS WISPLGPLRI AIAQPVRKFA GDKIQKLQFQ IGTSF
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