| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2559 |
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| Symbol | truB |
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| ID | 4670518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2722133 |
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| End bp | 2723134 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839624 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_986793 |
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| Protein GI | 121594897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0116383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC GCGCTCCCCG CATCCGGGTG CAGCGGCGCC CGGTGCACGG AGTGCTGCTG
CTCGACAAAC CCCTGGGCCT GTCCAGCAAT GACGCCTTGC AGAAGGTGAA GTGGCTGCTG
CGCGCCGAGA AGGCTGGCCA CACGGGCACG CTGGACCCGC TGGCCAGTGG TGTGCTGCCG
CTGTGCTTTG GTGCCGCCAC CAAGTTCAGC CAGTTGCAGC TGGAAGCGCC CAAGACCTAT
GAAGCCGTCG CACTGTTGGG TACCACCACA ACCACCGGTG ACGCCGAGGG TCAGGTGCTG
GCGCAGTGCG CGGTCGATCC GGCCATGCTC ACACCCGAGC GGCTGGCGGC GGTACAGGCG
CAGTTCACTG GCCCCATCCG CCAGGTGCCG CCCATGCACA GCGCGCTCAA GAAAGACGGC
AAGGCGCTGT ACGAGTACGC GCGTGCCGGC ATTGCCGTGG AGCGCGAGGC GCGTGATGTC
ACGATCCATG CATTGAAACT GGCGCTAACG CATACGGAGC AAGCGCAACC AGCTATTAAA
ATAGTAGTGA CCTGCAGCAA AGGTACCTAC ATCCGCACCC TGGGCGAAGA CATCGGCCAG
GCGCTGGGCT GCGGCGCGCA TCTCACGTTC CTGCGCCGTA TCGACACGGG CGGTATCGGC
GTGGAGCGAT GCGTGACGCT GGAGGCGCTG CAGGCCATGG ACGAGGATGC GCGCATGGCC
TGCGTGCACC CGGTGGAGAC CTTGCTGGCG CAGCACACGG CTGTCACGCT GGACGATGAC
AATGCCGGGC GTTTCCTCTC GGGCATGCGC CGGCGCGGCC CCTGGCCCGA CGCGCCCGCC
GTGGCCGTGT TCGGGGCGCG CCCGCGCGTG CTGCTGGGGG TCGGGCATGT GCGGGGAGGA
GAGCTGATTC CAGACCGGCT GCTCAGCCCC CTTGAAATTC AACAGATTCT GGAGAGCTCG
CCGCGGGCTG AACGCGGCAC ATTGGAAGCA ACTACGCTAT GA
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| Protein sequence | MTERAPRIRV QRRPVHGVLL LDKPLGLSSN DALQKVKWLL RAEKAGHTGT LDPLASGVLP
LCFGAATKFS QLQLEAPKTY EAVALLGTTT TTGDAEGQVL AQCAVDPAML TPERLAAVQA
QFTGPIRQVP PMHSALKKDG KALYEYARAG IAVEREARDV TIHALKLALT HTEQAQPAIK
IVVTCSKGTY IRTLGEDIGQ ALGCGAHLTF LRRIDTGGIG VERCVTLEAL QAMDEDARMA
CVHPVETLLA QHTAVTLDDD NAGRFLSGMR RRGPWPDAPA VAVFGARPRV LLGVGHVRGG
ELIPDRLLSP LEIQQILESS PRAERGTLEA TTL
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