| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2558 |
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| Symbol | |
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| ID | 4670851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2720307 |
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| End bp | 2722136 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839623 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_986792 |
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| Protein GI | 121594896 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.551008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00829209 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAAC AAATCCGCAA CATCGCCATC ATCGCCCACG TCGACCATGG CAAGACCACG
ATGGTGGACC AACTGCTGCG CCAGTCCGGC ACCTTCGCCG AGCACGAGAA GGTCGTGGAC
ACCGTGATGG ACAGCAACGC CATCGAGCGC GAGCGCGGCA TCACCATCCT GGCGAAGAAC
TGCGCCGTGA GCTGGAACGG CACGCACATC AACATCCTGG ACACGCCCGG CCACGCGGAC
TTCGGCGGCG AGGTGGAGCG TGCACTGTCG ATGGTGGACG GCGTGGTGCT GCTGATCGAC
GCGCAGGAAG GCCCCATGCC CCAGACGCGC TTCGTGACCA AGAAGGCGTT GGCGCTGGGC
CTCAAGCCCA TCGTGGTGGT CAACAAGGTG GACAAGCCCG GCGCGCGCCC CGACTACGTG
GTGAACGCCG CTTTCGATCT GTTCGACAAG CTGGGCGCCA CCGACGAGCA ACTGGACTTT
CCCGTGGTCT ACGCCTCGGG CATCAACGGC TGGAGCTCCC TGGAGCAGGG CAACCCCGGC
GAGCAATGGG GCCCCGACAT GTCGGCGCTG TTCGAGACCA TCCTCAAGCA TGTGCCGTCC
GTGAAGGGTG ACGCCACGGC ACCCCTGCAG ATGCAGGTAT CGGCGCTGGA CTATTCCACC
TTCGTGGGCC GCATTGGCGT GGGTCGCATC ACCCAGGGTA CGCTCAAGGC CGGGCAGGAC
GTGCTGGTCA TGGCTGGCCC CGATGGCGCC AGCTACAAGG GCCGCGTGAA CCAGATCCAC
CAGTTCCAGG GCCTGGACCG CGTGCAGGTG AGCGAAGCCG GCCCCAGCGA GATCGTGCTC
ATCAACGGCA TCGAGAACGT GGGTATCGGC GAGACCCTCA CCGACCCCGC CAACCCCCAG
CCGCTGCCCA TGCTGAAGAT CGACGAGCCC ACGCTGACGA TGAACTTCTG CGTGAACACC
TCGCCGCTGG CGGGCCGTGA AGGCAAGTTC GTGACCAGCC GCCAGATCTG GGACCGTCTG
CAGAAGGAGC TGCGTTCCAA CGTGGCCCTG CGCGTCAAGG AAACCGACGA GGACGGCATC
TTCGAGGTGT CCGGCCGCGG CGAACTGCAC CTGACCATCC TGCTGGAAGA AATGCGCCGT
GAAGGCTACG AGCTGGCCGT TTCCAAGCCG CGCGTGGTGT ACCGCGACAT CGACGGCGAG
CGCTGCGAGC CTATCGAACT GGTGACTGCT GATATCGAGG AAGGCCACCA AGGCGGTGTG
ATGCAGGCCC TCGGCGAGCG CAAGGGTGAA CTGGTGAACA TGGAGCCTGA CGGCCGTGGC
CGCGTGCGCC TGGAGTACCG CATCCCGGCC CGTGGCCTGA TCGGTTTCAC CAACGAATTC
CTGAACCTGA CGCGCGGCTC GGGCCTCATC AGCAACATTT TCGACAGCTA TGAGCCGCAT
AAGGGCGACA TTGGTGGCCG CAAGAACGGC GTTCTGATTT CCATGGACGA TGGTGAAATT
TTCACCTACG CCCTGGGCAA GCTCGACGAC CGTGGCCGCA TGTTCGTGAA GGCAGGCGAC
CCGGTGTACG AAGGCATGAT CGTCGGCGTG CACAACCGCG ACAACGACCT GGTGGTGAAC
GCCACGCGTA CCAAGCAGCT CACCAACTTC CGCGTGAGCG GCAAGGAAGA CGCGATCAAG
ATCACGCCCC CGATCGACCT CACGCTGGAG TACGGTGTGG AGTTCATCGA GGACGATGAA
CTGGTGGAGA TCACGCCCAA GAGCATTCGC CTGCGCAAGC GCCACCTCAA GGAGCACGAG
CGCAAGCGCG CCAGCCGCGA AGGCGCGTGA
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| Protein sequence | MSKQIRNIAI IAHVDHGKTT MVDQLLRQSG TFAEHEKVVD TVMDSNAIER ERGITILAKN
CAVSWNGTHI NILDTPGHAD FGGEVERALS MVDGVVLLID AQEGPMPQTR FVTKKALALG
LKPIVVVNKV DKPGARPDYV VNAAFDLFDK LGATDEQLDF PVVYASGING WSSLEQGNPG
EQWGPDMSAL FETILKHVPS VKGDATAPLQ MQVSALDYST FVGRIGVGRI TQGTLKAGQD
VLVMAGPDGA SYKGRVNQIH QFQGLDRVQV SEAGPSEIVL INGIENVGIG ETLTDPANPQ
PLPMLKIDEP TLTMNFCVNT SPLAGREGKF VTSRQIWDRL QKELRSNVAL RVKETDEDGI
FEVSGRGELH LTILLEEMRR EGYELAVSKP RVVYRDIDGE RCEPIELVTA DIEEGHQGGV
MQALGERKGE LVNMEPDGRG RVRLEYRIPA RGLIGFTNEF LNLTRGSGLI SNIFDSYEPH
KGDIGGRKNG VLISMDDGEI FTYALGKLDD RGRMFVKAGD PVYEGMIVGV HNRDNDLVVN
ATRTKQLTNF RVSGKEDAIK ITPPIDLTLE YGVEFIEDDE LVEITPKSIR LRKRHLKEHE
RKRASREGA
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