| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2554 |
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| Symbol | |
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| ID | 4670971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2716790 |
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| End bp | 2717305 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839619 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_986788 |
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| Protein GI | 121594892 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00472204 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCG TCCAGATCGT GGAGCAACTG CCGGGGTTGC GCCGCTATGC GCGCGCGCTC
ACCGGCGACG CATGGGCAGC CGACGATCTG GTGCAGGACA CGCTGGAGCG CGCCTGCCGC
AAGTGGCTGC TGTGGCGCGG CGGCAGCAAT CTGCGCGCCT GGCTTTTCAC GCTGATGCAC
AACCTGTACC TCAACCAGCG CCGCGGCCTG GTGCCCGTGC AGGCGCTGGA TGTGGATGCC
CTGGCGGCCA TCGCGGACGC GGCTGACGCC TCCCACGAAA CAGCCATGGA CCTGGACCGC
TGCCTGCAAC GCCTGCCCGC CGATCAACGG GCCGTGCTGC TCCTGGTGAC ACTGGAAGAC
ATGGCCTATG CCGACGTGGC GCGTGTGCTG GGCATTCCGG AAGGCACGGT GATGTCGCGG
TTGTCCCGCG CTCGCGCACG CATGCGCGAA TTGATGGAGC CCTCAGTCCA CGCCCAGCCG
TCATCCACCC CGACTGCCTT GCGCCGCATG AAATGA
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| Protein sequence | MNRVQIVEQL PGLRRYARAL TGDAWAADDL VQDTLERACR KWLLWRGGSN LRAWLFTLMH
NLYLNQRRGL VPVQALDVDA LAAIADAADA SHETAMDLDR CLQRLPADQR AVLLLVTLED
MAYADVARVL GIPEGTVMSR LSRARARMRE LMEPSVHAQP SSTPTALRRM K
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