| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2551 |
|---|
| Symbol | |
|---|
| ID | 4671326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2715281 |
|---|
| End bp | 2715721 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639839616 |
|---|
| Product | cyclase/dehydrase |
|---|
| Protein accession | YP_986785 |
|---|
| Protein GI | 121594889 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00422597 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG TCAACAAGTC CGTCCTCATC TGGTACAGCC CCGAAGAAAT GTTCGCCCTC
GTGACGGACG TGGCCAAGTA TCCGCAGTTC CTGCCGTGGT GCGACCACGC CACCGTCCTG
GAAACCCATG CAAACGGCAT GAAGGCGGAA GTGGGCATTG CGTTGGGCGG CATACGCAAG
TCGTTTGTTA CGCGCAATAC GCATGAGCCC GGGCGCCGCG TCAAGATGGA GCTGGTGGAG
GGCCCCTTTT CACAGCTCGA CGGCGACTGG CACTTTCATC CTGTGGGGGA CGGTACGCAG
CGCGCATGCA AGGTCGAACT CCAGCTGAGC TACGGCTTTG ACAACCGGGC ATTGGCGGCG
TTGGTCGGCC CCGTGTTTGA CCGCATCGCC GCCACGTTCA TCGATGCCTT CATCAAACGG
GCCGAGCAGG TTTATGGCTG A
|
|---|
| Protein sequence | MKTVNKSVLI WYSPEEMFAL VTDVAKYPQF LPWCDHATVL ETHANGMKAE VGIALGGIRK
SFVTRNTHEP GRRVKMELVE GPFSQLDGDW HFHPVGDGTQ RACKVELQLS YGFDNRALAA
LVGPVFDRIA ATFIDAFIKR AEQVYG
|
|---|
| |