Gene Ajs_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2549 
Symbol 
ID4671410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2714256 
End bp2714858 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID639839614 
Producthypothetical protein 
Protein accessionYP_986783 
Protein GI121594887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00444447 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAGCTC CAAAAAAAGG ATTGTACCCG CCGCGCGACA AATCGCACAC GTCCCGCGTG 
AACGCCCCTT GGTGGGTGCG GCCGCTCACC GCTACACTCG CCCGCATGAA ACCGCACAAG
CTTCTTCTGC TGGCGCTGGG CTGCTCCTGG GCCATGGGCG CATCGGCCCA ATGGCAATGG
GTGGACAAGG ATGGGCGCAA GGTGTTCAGC GACCGCCCAC CGCCACAGGA CATTCCTGAC
AAGAGCATTC TCAAGCAACC GCAGCGCGCC CTGCCGCGTA CCGCGATGGC AGCGCCCGCA
TCGCCAGCGT CGGCTCCCGC ATCCGAAGCC GCCGCGCCTG CCAGCGGCAA GGACAAGCAG
CTGGAGGAGA ACAAGGCCAA GGCTGACGCC GCCGAAGCCG CCAAGAAGAA AGCGGAGGAA
GACCGCGTGG CCAAGGCCCG TGCCGACAAC TGCGCGCGCG CCAAACGCGC AAAGGAGCAG
TTGGCGCCCG GCCAGTTGGT GAGCAATGTC AATGCCAAGG GGGAGCGGGG CTTCATGGAC
GACGCAACCC GCGCAGCAGA ATTACGCCGA GCGGAAGCGA CCATCGCTTC CGACTGCAAG
TAG
 
Protein sequence
MKAPKKGLYP PRDKSHTSRV NAPWWVRPLT ATLARMKPHK LLLLALGCSW AMGASAQWQW 
VDKDGRKVFS DRPPPQDIPD KSILKQPQRA LPRTAMAAPA SPASAPASEA AAPASGKDKQ
LEENKAKADA AEAAKKKAEE DRVAKARADN CARAKRAKEQ LAPGQLVSNV NAKGERGFMD
DATRAAELRR AEATIASDCK