Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2545 |
Symbol | |
ID | 4671494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2709239 |
End bp | 2709484 |
Gene Length | 246 bp |
Protein Length | 81 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639839610 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_986779 |
Protein GI | 121594883 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.227611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000981483 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGCAA CGACAAGCAA GACGCTCATC AATCGGAAGA AGCTACTGGC GATGATCCCG CTGTCTGAGC GCACGATCTT CAACATGGAG CAGCGCGGGG AGTTTCCGCG CCGGATCGCA CTCACCAGCC GAAACGTCGC CTGGGACTTG GCCGAGGTCG AGGAATGGAT CGAGGCGCGG AAGTCGTCGG GCACTCAGGC GATGCGGCCT GGCTTCACCC AGTCGGTCGC CGCCGCCACT TTTTAG
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Protein sequence | MQATTSKTLI NRKKLLAMIP LSERTIFNME QRGEFPRRIA LTSRNVAWDL AEVEEWIEAR KSSGTQAMRP GFTQSVAAAT F
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