Gene Ajs_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2541 
Symbol 
ID4672146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2706113 
End bp2706982 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content60% 
IMG OID639839606 
Productplasmid and phage iteron-binding protein 
Protein accessionYP_986775 
Protein GI121594879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.127088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000246073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTTG ACCTCACCCA TGCCAGGCAC GATCCAATGC ACTGCTTGGT CCCCGGCTTG 
TTCCGCAGTC TCAAGCGCGG CGAACGGAAG AAGCTCAAGC TCGATGTGAC GTATCACTAC
GCCGAAAATG AACTAGCGCG GTTCGTCGGA TTCGAGCCTC TTGGTGCTGA TGACATGCGG
CTGCTGCAAG GTCTTGTGGC TCTTGGAGGG CCGAAGGGCA TCATCCTGAC GCCAGAGCCA
ACAGCGGACT TGCCGAAGCA ACTCCGTCTA TTCCTTGAGC CGAAGTTCGA CGCGGTAGGG
CAGGATGCGC TGGTCGTGAG AGAGAGTATG ACCAGCCTGC TAGGCGAAAT CGGCTTGACC
GATGGCGGCG ACAATATCAG GGCGATCAAG GCGAGCTTGC TGCGCATGGC AAACGTGACG
GTGGTCGTCA CCAAGGGGAG CAGGCAAAGG TCTTTTCACC TGATGAGCTA CGCCTTCGAC
GAGGAGGACG GACGGCTATT CGTCGCGCTG AATCCTCAGA TTGCAGAGGC GATTCTTGGG
CGTCGCCCGT ATACCCGCAT CGAGATGGCC GAGGTGCGGG CGCTACAGAC TGACCCGGCC
CGTCTGATTC ACCAGCGGCT ATGCGGCTGG ATCGATCCGG GCAAAGCCGG GCGTGTGGAA
CTGGATACCC TTTCCGGTTA TGTCTGGCCG GACCAGGCGA ACGCCGAGGC CATGAAGAAG
CGCCGCCAGA AGGCCCGCAA GGCTCTGGCC GAACTTGCCA CCGTGGGATG GAAGGTCAGC
GAGTATGCGG CAGGGAAGTG GGAAATAGGC AGGCCGAAGC CCGTAGTAAC GTTCCCCAAG
CTCCGTAGCA ACGTTCCCCT TCACCCGTAG
 
Protein sequence
MAFDLTHARH DPMHCLVPGL FRSLKRGERK KLKLDVTYHY AENELARFVG FEPLGADDMR 
LLQGLVALGG PKGIILTPEP TADLPKQLRL FLEPKFDAVG QDALVVRESM TSLLGEIGLT
DGGDNIRAIK ASLLRMANVT VVVTKGSRQR SFHLMSYAFD EEDGRLFVAL NPQIAEAILG
RRPYTRIEMA EVRALQTDPA RLIHQRLCGW IDPGKAGRVE LDTLSGYVWP DQANAEAMKK
RRQKARKALA ELATVGWKVS EYAAGKWEIG RPKPVVTFPK LRSNVPLHP