Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2541 |
Symbol | |
ID | 4672146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2706113 |
End bp | 2706982 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639839606 |
Product | plasmid and phage iteron-binding protein |
Protein accession | YP_986775 |
Protein GI | 121594879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.127088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000246073 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTTTG ACCTCACCCA TGCCAGGCAC GATCCAATGC ACTGCTTGGT CCCCGGCTTG TTCCGCAGTC TCAAGCGCGG CGAACGGAAG AAGCTCAAGC TCGATGTGAC GTATCACTAC GCCGAAAATG AACTAGCGCG GTTCGTCGGA TTCGAGCCTC TTGGTGCTGA TGACATGCGG CTGCTGCAAG GTCTTGTGGC TCTTGGAGGG CCGAAGGGCA TCATCCTGAC GCCAGAGCCA ACAGCGGACT TGCCGAAGCA ACTCCGTCTA TTCCTTGAGC CGAAGTTCGA CGCGGTAGGG CAGGATGCGC TGGTCGTGAG AGAGAGTATG ACCAGCCTGC TAGGCGAAAT CGGCTTGACC GATGGCGGCG ACAATATCAG GGCGATCAAG GCGAGCTTGC TGCGCATGGC AAACGTGACG GTGGTCGTCA CCAAGGGGAG CAGGCAAAGG TCTTTTCACC TGATGAGCTA CGCCTTCGAC GAGGAGGACG GACGGCTATT CGTCGCGCTG AATCCTCAGA TTGCAGAGGC GATTCTTGGG CGTCGCCCGT ATACCCGCAT CGAGATGGCC GAGGTGCGGG CGCTACAGAC TGACCCGGCC CGTCTGATTC ACCAGCGGCT ATGCGGCTGG ATCGATCCGG GCAAAGCCGG GCGTGTGGAA CTGGATACCC TTTCCGGTTA TGTCTGGCCG GACCAGGCGA ACGCCGAGGC CATGAAGAAG CGCCGCCAGA AGGCCCGCAA GGCTCTGGCC GAACTTGCCA CCGTGGGATG GAAGGTCAGC GAGTATGCGG CAGGGAAGTG GGAAATAGGC AGGCCGAAGC CCGTAGTAAC GTTCCCCAAG CTCCGTAGCA ACGTTCCCCT TCACCCGTAG
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Protein sequence | MAFDLTHARH DPMHCLVPGL FRSLKRGERK KLKLDVTYHY AENELARFVG FEPLGADDMR LLQGLVALGG PKGIILTPEP TADLPKQLRL FLEPKFDAVG QDALVVRESM TSLLGEIGLT DGGDNIRAIK ASLLRMANVT VVVTKGSRQR SFHLMSYAFD EEDGRLFVAL NPQIAEAILG RRPYTRIEMA EVRALQTDPA RLIHQRLCGW IDPGKAGRVE LDTLSGYVWP DQANAEAMKK RRQKARKALA ELATVGWKVS EYAAGKWEIG RPKPVVTFPK LRSNVPLHP
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