| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2538 |
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| Symbol | |
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| ID | 4672338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2703403 |
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| End bp | 2704188 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839603 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_986772 |
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| Protein GI | 121594876 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0724206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000648987 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACACG TCCGCCTTTT AGCGGCTAAA ACCGCGCTCG CCGCCGTCCT GGCCGGCAGC
ATCATCATCA CGCCCGCGCA GGCCGGCATC CCCGTCATCG ACGGCGGCAA TCTGATTCAG
AACGTCATGA CCGCCATCGA GTCGGTGGCG CAGACGCTCA AGCAGATTGA GCAGTACCAG
ACCCAATTGC AGCAGTACGA AAACATGCTG CAAAACACGA TGGCGCCGGC GGCCTACATC
TGGGATCAGG CGCAGTCCAC CATCAACGGC TTGATGGCCG CCACCGACAC GCTGAACTAC
TACAGGAATC AGCTCGGTAG CGTCGATGCG TACCTGGGCA AGTTCCAGGA CGTGGCCTAC
TACCGTGGTT CGCCGTGCTT CTCGGCTGCC GGGTGCTCGG ATGCGGAGCG CGCCGCGATG
GAGCAAAACC GCAGCCTGGC GAGCGAGAGC CAGAAGAAAG CGAACGGCGC GCTTTTCAAG
GGTCTTGAGC AACAGCAGCG CAACCTTACT GCTGACGCTC GCCAGCTCGA ACGGCTCCAG
TCGGCCGCGC AGGGTGCGAC CGGCCAGATG CAAGCCATCG GCTTCGCTAA TCAGCTCGCC
GCCAACCAGG CAAACCAGCT CCTGCAAATC CGTGGCCTGC TGATCGCGCA GCAGAACGCC
GCGACGGCCA GGATGCAGGC GCAGGCCGAC CTAGAGGCGC AACAGCAGGC CGCCGGCGCG
ACTTCCCGGG AGTCCAGGAT CGAGCGCACG GCCAGCCCGA AGAACTGGCT CGAACTGACC
CGCTGA
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| Protein sequence | MKHVRLLAAK TALAAVLAGS IIITPAQAGI PVIDGGNLIQ NVMTAIESVA QTLKQIEQYQ
TQLQQYENML QNTMAPAAYI WDQAQSTING LMAATDTLNY YRNQLGSVDA YLGKFQDVAY
YRGSPCFSAA GCSDAERAAM EQNRSLASES QKKANGALFK GLEQQQRNLT ADARQLERLQ
SAAQGATGQM QAIGFANQLA ANQANQLLQI RGLLIAQQNA ATARMQAQAD LEAQQQAAGA
TSRESRIERT ASPKNWLELT R
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