| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2531 |
|---|
| Symbol | |
|---|
| ID | 4672915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2699456 |
|---|
| End bp | 2699656 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639839598 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_986767 |
|---|
| Protein GI | 121594871 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.334421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000129846 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAC CTGATAGCGA AATTCTCACG CTGGATGAAG TGGCGGTCTA CCTCAAGGCA
GGGAAGAAGA CCGTTTACCG GCTGGCCCAG CAGGGGGAGA TACCGGGATT CAAGCTGGGC
GGCACCTGGC GGTTTCGTCG CAGCGAGTTG GATCGCTGGA TTGCCGCGCA GATAGCCGAG
AAAACGCAGG ACAAGACATG A
|
|---|
| Protein sequence | MNQPDSEILT LDEVAVYLKA GKKTVYRLAQ QGEIPGFKLG GTWRFRRSEL DRWIAAQIAE
KTQDKT
|
|---|
| |