| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2520 |
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| Symbol | |
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| ID | 4673585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2680417 |
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| End bp | 2682114 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639839587 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_986756 |
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| Protein GI | 121594860 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00121235 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCACA CCGCTACCTC CACCGCCGCA TCCCGCACGG GCGGGCAGAT CCTCGTCCAG
CAGCTCATCG TGCACGGCGT GCAGCAGCTC TTTTGCGTGC CGGGCGAGAG CTACCTGGCC
GTGCTGGACG CCCTGCACGA CGCCAACATC GCCGTCACCG TGTGCCGCCA GGAGGGCGGC
GCGGCCATGA TGGCCGAGGC GCAGGGCAAG CTGACCGGCC GCCCGGGCAT CTGCTTCGTG
ACGCGCGGGC CGGGGGTCAC CAACGCATCG GCGGGCATCC ACATCGCGCA CCAGGATTCG
ACGCCGTTGA TCGTCTTCGT AGGCCAGGTG GCGCGCGGTG CGCTGGGGCG CGAGGCGTTC
CAGGAGCTGG ACTACGGCGC CGTGTTCGGC ACCATGGCCA AGTGGGTGGT GCAGATCGAC
GATGCGCGGC GCGTGCCGGA GCTGGTCTCG CGCGCATTCC ACGTCGCCAC CTCGGGCCGC
CCCGGCCCCG TGGTGGTGGC CCTGCCCGAG GACATGCTGA CCGATGCCGT GCAGGTGGCC
GATGCCCTGC CCTACTCCGT GCCCGAGACC TACCCCGGCG CGCCCGCACT GCAGGCACTG
GCGGCGCGGC TGCAGGCGGC CGAGCGGCCG GTGGTCATCG TGGGCGGCAG CCGCTGGTCC
GACCAGGCGG TGCGCGACAT GCAGGCCTTT GCCAGCGCCT GGCGGCTGCC GGTGTATTGC
TCGTTCCGCC GGCAGATGCT GTTCCCGGCC AACCACGCCA GCTACGCGGG CGACCTGGGC
CTGGGCGTCA ACCCCCAACT GCTGGCGCGC ATCCGCGCGA GCGACCTGGT GCTGGTGCTG
GGCGGGCGGC TGTCGGAGAT CCCCTCGCAG GGCTACGAGC TGTTCGACAT TCCCGTGCCG
GCGCAGCCGC TGGTGCATGT GCATGCGGAT GCCGACGAAC TTGGCAAACT CTACCGCCCG
GTGCAGGCCA TCCACGCCAC GCCGCAGGCC ATGGCCGCCG CCCTGGCCAG CCTGCGCCCC
GCGGCCGAGC CGCGCTGGAC CGCGCACACC GAGGCTGCGC GCGCCGAGTA CCTGGCCTGG
AGCGACCCGG CGCCCATCCG CATCCCCGGC AAGCTGCAGA TGGGCGAGGT GATGCAGCAC
CTGCGCGCGG TGCTGCCCGC CAACACCATC TTCTGCAACG GCGCGGGCAA CTTCGCCACC
TGGGTGCACC GCTTCTGGCC GTTCACCACC TATGCGAGCC AACTGGCCCC CACCAGCGGC
TCGATGGGCT ACGGCCTGCC GGCCGGCGTG GGCGCCAAGC GCCTGTGGCG CGAGCGCGAG
GTGGTGGTGT TTGCGGGCGA CGGCGACTTT CTGATGCACG GCCAGGAGTT CGCCACCGCC
GTGCAGTACG GCCTGCCGCT GATAGTGGTG CTGTTGGACA ACGCCATGTA CGGCACCATC
CGCATGCACC AGGAGCGCGA GTACCCCGGG CGCATTAGCG CCACACAGCT CAAGAACCCC
GATTTCAAGG CCTATGCCCA GGCCTTCGGC GGGCACGGCG AGCGCGTGGA GCGCACCGAA
GACTTCGCCC CGGCACTGGC ACGCGCACGG GCGAGCGGGC TGCCCAGCGT GCTGCACTGC
CTGATCGATC CGCAGGCGAT CACACCCACG GGAACGCTGG ATGGCATCCG GTCGGCGGCA
ATGGCGCGCA AGGGGTGA
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| Protein sequence | MPHTATSTAA SRTGGQILVQ QLIVHGVQQL FCVPGESYLA VLDALHDANI AVTVCRQEGG
AAMMAEAQGK LTGRPGICFV TRGPGVTNAS AGIHIAHQDS TPLIVFVGQV ARGALGREAF
QELDYGAVFG TMAKWVVQID DARRVPELVS RAFHVATSGR PGPVVVALPE DMLTDAVQVA
DALPYSVPET YPGAPALQAL AARLQAAERP VVIVGGSRWS DQAVRDMQAF ASAWRLPVYC
SFRRQMLFPA NHASYAGDLG LGVNPQLLAR IRASDLVLVL GGRLSEIPSQ GYELFDIPVP
AQPLVHVHAD ADELGKLYRP VQAIHATPQA MAAALASLRP AAEPRWTAHT EAARAEYLAW
SDPAPIRIPG KLQMGEVMQH LRAVLPANTI FCNGAGNFAT WVHRFWPFTT YASQLAPTSG
SMGYGLPAGV GAKRLWRERE VVVFAGDGDF LMHGQEFATA VQYGLPLIVV LLDNAMYGTI
RMHQEREYPG RISATQLKNP DFKAYAQAFG GHGERVERTE DFAPALARAR ASGLPSVLHC
LIDPQAITPT GTLDGIRSAA MARKG
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