Gene Ajs_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2506 
Symbol 
ID4674568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2668628 
End bp2669197 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content72% 
IMG OID639839573 
ProductMgtC/SapB transporter 
Protein accessionYP_986742 
Protein GI121594846 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.174906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0242046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT GGTGGGCTGA CGCCCTGGCC GTGGCCGCCC ACGAGTTCTC GGACATTGGC 
GACCCCCAGC AAACCACGCG GGTGGTCTTG CGCATAGGCG TAGCCGCGCT GCTGGGCGGC
CTGCTGGGGT GGGAGCGCGA GCAGGCCGGC AAGGCCGCGG GCATGCGCAC CCATATGCTG
GTGGCCATGG GCGCCGCGTT GTTCGTGCTC GTCGCGCAGC AGGCGGGCAT TGCCCCGGCG
GACAACAGCC GTGTGCTGCA AGGGGTGATC GCCGGCATCG GCTTCCTGGG TGCGGGCACC
ATCCTGAAGG GCGACGCGGA AGGCCAGGTC AAGGGCCTGA CCACCGCGGC CGGCATCTGG
CTCACGGCCG CCATCGGCGT GGCCGCGGGC CTGGGGCGTG AGAGCACGGC CATCCTGGGC
ACGCTGCTGG CAGTGGTGGT GCTGTGGGTG ATTCCTCTGG CACAGCGCGC CGCCCCGACG
GACCCGGGCC AGCCCGCGGC TCGACGCAAA CGCCTGCGGC GCAAAACGCG CGCTGGTCTG
ACAGCCGATA CGCCGCAGGA TGGCCTGTAA
 
Protein sequence
MTGWWADALA VAAHEFSDIG DPQQTTRVVL RIGVAALLGG LLGWEREQAG KAAGMRTHML 
VAMGAALFVL VAQQAGIAPA DNSRVLQGVI AGIGFLGAGT ILKGDAEGQV KGLTTAAGIW
LTAAIGVAAG LGRESTAILG TLLAVVVLWV IPLAQRAAPT DPGQPAARRK RLRRKTRAGL
TADTPQDGL