| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2505 |
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| Symbol | |
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| ID | 4674614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2667597 |
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| End bp | 2668403 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639839572 |
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| Product | tRNA pseudouridine synthase C |
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| Protein accession | YP_986741 |
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| Protein GI | 121594845 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.246785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0153229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGACGCCCG CGCACCCTCC GCTGCGCCTG CTGTGGCAGG ACGCGCACAT GGTGGCCGTT
TTCAAGCCGG CGGGCTGGCT GGTGCACCGC ACAGGTCTGG ACGCAGGCGA AACGCGCTTC
GTGATGCAGG CGCTGCGCGA CCAGATCGGC CAGCACGTCT ACCCCGTGCA CCGGCTGGAC
AAGGGCACCT GCGGCGTGCT CGTCATGGCC CTGCACCCCG CCGCCGCGCG GGCCCTGGCC
GATGCCTTCG CCCGGCATGC CGTGCGCAAG CAATACCTGG CGCTGGTACG CGGCTGGGCA
CCGGCGCAGG CCGAAGTGGA CCACCCGCTG CGCCCCGACG ACGCACCGCC CGACGCCCCC
ACCCAGCCCG CCCACACGCG CCTCACACGC CTGGCGCGGC TGGAGCTGCC CGAATGCAGC
GACCCCCGCT TCGCCACCAC GCGCGCATCG CTGGTGCGGG CCGAGCCGAC CACGGGGCGC
CGCCACCAAA TCCGCCGCCA CCTCAAGCAT CTGGCCCACC CCATCCTGGG TGACGCCACC
CACGGCAAGG GGCCGCTCAA CCGTTGGTGG GCACAGCGCC TCGGCCTGCA CCGCCTGTGG
CTGCATGCGT GGCAGCTCAG CCTGCCCCAC CCCGCAGACG GCCGCCTGGT CACGCTGCAC
AGTGGATTGC AGTGGCCCGC TGCCAGAACA TCCACCACCG CCAGCGCACC CCCGCAGCCA
AACGCGGACG CGGCGCCGGA TTGGCAGCAA CGCATCTGGA CCCTGCCCTG GCAGCAGGAT
ATCGAAGATT CGCTTCCAAA AGAGTAG
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| Protein sequence | MTPAHPPLRL LWQDAHMVAV FKPAGWLVHR TGLDAGETRF VMQALRDQIG QHVYPVHRLD
KGTCGVLVMA LHPAAARALA DAFARHAVRK QYLALVRGWA PAQAEVDHPL RPDDAPPDAP
TQPAHTRLTR LARLELPECS DPRFATTRAS LVRAEPTTGR RHQIRRHLKH LAHPILGDAT
HGKGPLNRWW AQRLGLHRLW LHAWQLSLPH PADGRLVTLH SGLQWPAART STTASAPPQP
NADAAPDWQQ RIWTLPWQQD IEDSLPKE
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