Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2496 |
Symbol | |
ID | 4673828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2660419 |
End bp | 2661309 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639839563 |
Product | peptidase M23B |
Protein accession | YP_986732 |
Protein GI | 121594836 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0441433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0477862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCATTTC CTTGCGACCC CACTTTTCCG CCCCTTTCCC CCTCAGGCGC ACGGCGCCGC ACGCTGCTGC AGGCGCTGGG CCTCGCCCTG GCGCCCGGCA TGCCCGCGCT GGTCCTGGCG GGCACCGCCC AGCAATGGCC GCAGGCCCTG GCCGTGCCCG GGGGCGTGGC CCGGCTGTCG CTGGGCCCCG CGGCCGATCG GCCGGTGGTA CACGCGGGCG ACGTCCCGGT GCTGGTGCTG GGCGATGCGA TCGAGTGGAC GGCCATCGTC GGCATCCCGC TGGCCGCGCC TACGGGCGAG GCCGAGGTGA CGGTACAGGC CACGCCGACC GCACCGGCGC GGCGCGTGGC TTACCGCGTG GCAGCCAAGC AGTACCGCGA GCAGCGCCTG ACCGTGGCAC CGCGCACGGT GGACCTGGCA CCCGAAGACC TGGCCCGCCA CGAGCGTGAG CGCGCCCACC AGCAGCACGT CATGGCCACC TTTTCAACGC CCCTGCCAGA GGGGCTGCAG ATGCGTCAGC CCGTGCCGGG ACGGCGCTCC AGCAGCTTCG GTCTGCGGCG CGTGTTCAAC GGCCAGGCGC GCAATCCGCA CAGCGGCATG GACATTGCCG CCGCCACGGG CACCCCTGTC GCCGCGCCGC TGGCGGGCCG GGTGATCGAT GTGGGCGACT ATTTCTTCAA CGGCGGCACC GTTTGGCTGG ACCATGGCGG CGGCCTGCTC AGCATGTACT GCCACCTCAG CCGCATGGAG TGCCAGGTGG GTGACGTACT GCGCACGGGC GATGCGTTCT GCAAGGTAGG GGCCACCGGC CGCGTGACCG GCCCGCACCT GCACTGGGGC GTGATGCTCA ACCGCACCAT GGTGGACCCG GCCCTGTTCC TGCCCGCATG A
|
Protein sequence | MPFPCDPTFP PLSPSGARRR TLLQALGLAL APGMPALVLA GTAQQWPQAL AVPGGVARLS LGPAADRPVV HAGDVPVLVL GDAIEWTAIV GIPLAAPTGE AEVTVQATPT APARRVAYRV AAKQYREQRL TVAPRTVDLA PEDLARHERE RAHQQHVMAT FSTPLPEGLQ MRQPVPGRRS SSFGLRRVFN GQARNPHSGM DIAAATGTPV AAPLAGRVID VGDYFFNGGT VWLDHGGGLL SMYCHLSRME CQVGDVLRTG DAFCKVGATG RVTGPHLHWG VMLNRTMVDP ALFLPA
|
| |