Gene Ajs_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2496 
Symbol 
ID4673828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2660419 
End bp2661309 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content73% 
IMG OID639839563 
Productpeptidase M23B 
Protein accessionYP_986732 
Protein GI121594836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0441433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0477862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCATTTC CTTGCGACCC CACTTTTCCG CCCCTTTCCC CCTCAGGCGC ACGGCGCCGC 
ACGCTGCTGC AGGCGCTGGG CCTCGCCCTG GCGCCCGGCA TGCCCGCGCT GGTCCTGGCG
GGCACCGCCC AGCAATGGCC GCAGGCCCTG GCCGTGCCCG GGGGCGTGGC CCGGCTGTCG
CTGGGCCCCG CGGCCGATCG GCCGGTGGTA CACGCGGGCG ACGTCCCGGT GCTGGTGCTG
GGCGATGCGA TCGAGTGGAC GGCCATCGTC GGCATCCCGC TGGCCGCGCC TACGGGCGAG
GCCGAGGTGA CGGTACAGGC CACGCCGACC GCACCGGCGC GGCGCGTGGC TTACCGCGTG
GCAGCCAAGC AGTACCGCGA GCAGCGCCTG ACCGTGGCAC CGCGCACGGT GGACCTGGCA
CCCGAAGACC TGGCCCGCCA CGAGCGTGAG CGCGCCCACC AGCAGCACGT CATGGCCACC
TTTTCAACGC CCCTGCCAGA GGGGCTGCAG ATGCGTCAGC CCGTGCCGGG ACGGCGCTCC
AGCAGCTTCG GTCTGCGGCG CGTGTTCAAC GGCCAGGCGC GCAATCCGCA CAGCGGCATG
GACATTGCCG CCGCCACGGG CACCCCTGTC GCCGCGCCGC TGGCGGGCCG GGTGATCGAT
GTGGGCGACT ATTTCTTCAA CGGCGGCACC GTTTGGCTGG ACCATGGCGG CGGCCTGCTC
AGCATGTACT GCCACCTCAG CCGCATGGAG TGCCAGGTGG GTGACGTACT GCGCACGGGC
GATGCGTTCT GCAAGGTAGG GGCCACCGGC CGCGTGACCG GCCCGCACCT GCACTGGGGC
GTGATGCTCA ACCGCACCAT GGTGGACCCG GCCCTGTTCC TGCCCGCATG A
 
Protein sequence
MPFPCDPTFP PLSPSGARRR TLLQALGLAL APGMPALVLA GTAQQWPQAL AVPGGVARLS 
LGPAADRPVV HAGDVPVLVL GDAIEWTAIV GIPLAAPTGE AEVTVQATPT APARRVAYRV
AAKQYREQRL TVAPRTVDLA PEDLARHERE RAHQQHVMAT FSTPLPEGLQ MRQPVPGRRS
SSFGLRRVFN GQARNPHSGM DIAAATGTPV AAPLAGRVID VGDYFFNGGT VWLDHGGGLL
SMYCHLSRME CQVGDVLRTG DAFCKVGATG RVTGPHLHWG VMLNRTMVDP ALFLPA