Gene Ajs_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2493 
Symbol 
ID4673676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2657151 
End bp2657639 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID639839561 
Productthioesterase superfamily protein 
Protein accessionYP_986730 
Protein GI121594834 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0808355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.025023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGT CCCTCTCTCC CTCAGGTGCG GCAGGCGCTG CAGGCACGGC CCAGCGGCCC 
CGGCCGCAGC CGCGCGAGGC CTACGCGGTG TTTCGCTCCA TCGGTACGCG CTGGATGGAC
AACGACGTCT ATGGCCATGT GAACAACGTC GTGTACTACA GCTGGTTCGA CACCGCGGTG
AATGCCTACC TGATCGAGCA GGGCGTGCTG GACATCCATC ACGGCGACAC CATCGGGCTG
GTCATCGAGA CGCAGTGCAA CTATTTCGCG TCGCTGGCGT TCCCGCAAAC CATCGACGCC
GGCATCCGTG TGGCGCGGCT GGGTGACACG AGCGTGCGCT ACGAGGTCGG CCTATTCGCC
CAGGGCGAGG CCATGAGTGC GGCTTGCGGC CACTTCGTGC ATGTGTACGT GGGACGGGAC
GACCGCCGTC CGCGTGCGCT GCCCGATCGG CTGCGCCAGG CACTGCAGCC CTTGTGCGTG
GCGCGTTGA
 
Protein sequence
MNTSLSPSGA AGAAGTAQRP RPQPREAYAV FRSIGTRWMD NDVYGHVNNV VYYSWFDTAV 
NAYLIEQGVL DIHHGDTIGL VIETQCNYFA SLAFPQTIDA GIRVARLGDT SVRYEVGLFA
QGEAMSAACG HFVHVYVGRD DRRPRALPDR LRQALQPLCV AR