Gene Ajs_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2490 
Symbol 
ID4673500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2653235 
End bp2654215 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID639839558 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_986727 
Protein GI121594831 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.56603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0359578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC CCCACATCCT CGTCGCGCGC AAGATCTTCC CCGAGGTCAT TGAGCGCCTG 
ACGCAGCATT TCGAGGTGTA TGCCAACCAG GACGACAACC TGTGGACGCA GGCCGAGCTC
ATCGAGCGGC TGCAGGGCAA GGACGGCGCA TTGCTCACCG GCACCCAGCC GGTGAACGCC
GAGCTGCTGG CCGCCTGCCC GCAGCTGCGC ATCGCGGCCA ACATGACGGT GGGCTACAAC
AACTTCGACA TCGCCGCGAT GACCGCCGCC GGCGTGCAGG GCACCAACAC GCCCGACGTG
CTGACCGAGA CCACGGCCGA TTTCGGCTTT GCGCTGCTCA TGGCCACGGC GCGGCGCATC
ACGGAGAGCG AGCATTACCT GCGCGCCGGC CAGTGGACGC GCTGGAGCTA CGACATGTTC
GCCGGCTGCG AGGTGCATGG CAGCACGCTG GGCATCCTTG GGATGGGCCG CATCGGACAG
GGCATTGCCA AGCGCGGGGC GCACGGCTTT GGCATGAACG TGATCTACCA CAACCGCTCG
CGCCTGTCGC CCGCGCTGGA GGCCGAATGC AAGGCGCGTT ACGTGGGCAA GGACGAGCTG
CTGGCCCAGG CCGACCACCT GGTGCTGGTG CTGCCCTACA CGCCCGAGTC GCACCATGCC
ATCGGCGCGG CCGAGATCGC GCGCATGAAG CCCACGGCCA CGCTGATCAA CATCGCGCGC
GGCGGCATCG TGGATGACGC GGCGCTGGCC CAGGCGCTCA AGGAGCGCCG CATCGCTGCC
GCGGGGCTGG ACGTATTCGA AGGCGAGCCC GCGGTGCACC CCGCATTGCT GGAAGTGCCC
AACGTGGTGC TCACCCCGCA CATCGCCAGC GCCACCGTGC CCACGCGGCT CGCCATGGCG
CAACTGGCGG CGGACAACCT GGTGGCGTTC TTCGACGGGC GCGGCGCCCT CACTCCCGTG
AACACGCCCG CCAAGGTGTG A
 
Protein sequence
MSKPHILVAR KIFPEVIERL TQHFEVYANQ DDNLWTQAEL IERLQGKDGA LLTGTQPVNA 
ELLAACPQLR IAANMTVGYN NFDIAAMTAA GVQGTNTPDV LTETTADFGF ALLMATARRI
TESEHYLRAG QWTRWSYDMF AGCEVHGSTL GILGMGRIGQ GIAKRGAHGF GMNVIYHNRS
RLSPALEAEC KARYVGKDEL LAQADHLVLV LPYTPESHHA IGAAEIARMK PTATLINIAR
GGIVDDAALA QALKERRIAA AGLDVFEGEP AVHPALLEVP NVVLTPHIAS ATVPTRLAMA
QLAADNLVAF FDGRGALTPV NTPAKV