| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2485 |
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| Symbol | |
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| ID | 4673139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2647490 |
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| End bp | 2648794 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839553 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_986722 |
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| Protein GI | 121594826 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0269411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACC TTGCCATCAC CGGCCTGTTG ATCCTGTCGC TGTTCCTGAT CCTGGGCAGC
GGCGTGTGGA TCGGGCTCAC GCTCTCGGGC GTGGCCTGGA TCGGCATGCA ATTGTTTTCC
TCGCGCCCCG CGGGCGACGC CATGGCGGTG ACCATCTGGG GCTCCTCGTC GAGCTGGACG
CTCACCGCCC TGCCCCTCTT CATCTGGATG GGCGAGATCC TGTTTCGCAC GCGGCTGTCG
CAAGACATGT TCAAGGGCCT GGCCCCGTGG GTGCAGGGCC TGCCCGGGCG GCTGCTGCAC
ACCAACGTGG TGGGCTGCAC CATCTTTGCC GCCGTGTCGG GGTCCAGCGC CGCCACCTGC
GCCACCATCG GCAAGATGAC GCTGCCCGAG CTCACGCGCC GCGGCTACCC CGAGAAGATG
GTCATCGGCA CGCTGGCCGG CGCCAGCACG CTGGGCCTGC TGATCCCGCC CTCGATCATC
ATGATCGTCT ACGGCGTGAC GGCCGAGGTA TCGATCTCCA AGCTGTTCAT TGCCGGCATG
CTGCCCGGGG TGCTGCTGGC CGCGCTGTTC TCGGGCTACA TCATGTTCTG GGCATTGCGT
CACCCCGACC AGGTCCCAGC GGCAGACCGG CAGATGGGCC TGCTGGACAA GCTGCGCGAA
TCGCGCGCGC TGATTCCCGT GGTGCTGCTC ATCGCCGCGG TGCTGGGCTC CATCTACACG
GGCATCGCCA CCGCCACCGA GGCCGCCGCC GTGGGCGTGG TGGGCTCGCT GGCGCTGTCC
GCGGCGCAGG GGTCGCTGAA CTGGGCGAGC TTTCGCGACG CGCTCATGGG CGCCACGCGG
CTGTACTGCA TGATCGCGCT GATCCTCGCG GGCGCGGCCT TCCTCACGCT GGCCATGGGC
TACATCGGCC TGCCGCGGCA CCTGGCGGAA TGGATCTCTT CGCTGGGGCT GAGCCAGGCG
CAACTGGTGG TGGCGCTGGC CGTGTTCTAC ATCGTGCTGG GCTGCTTCCT GGACGGCATC
TCCATGGTGG TGCTGACCAT GGGCGTGCTG ATGCCCACAG TGAGCGCAGC GGGCATCGAC
CCGATCTGGT TCGGCATCTT CGTCGTGCTG GTGGTGGAGA TGGCGCAGAT TACCCCGCCG
GTGGGCTTCA ACCTGTTCGT GCTGCAGGGC ATGACGGGCA AGCAGCTGCC GTGGATCGCC
CGCGTGACCG CTCCCATGTT CCTGCTGATG TGCGCGGCCG TCACGCTGAT CTATGTGTTT
CCGGGCATCG TGACCTGGCT CCCGCAGCAA ATGACGGCGC GTTGA
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| Protein sequence | MSDLAITGLL ILSLFLILGS GVWIGLTLSG VAWIGMQLFS SRPAGDAMAV TIWGSSSSWT
LTALPLFIWM GEILFRTRLS QDMFKGLAPW VQGLPGRLLH TNVVGCTIFA AVSGSSAATC
ATIGKMTLPE LTRRGYPEKM VIGTLAGAST LGLLIPPSII MIVYGVTAEV SISKLFIAGM
LPGVLLAALF SGYIMFWALR HPDQVPAADR QMGLLDKLRE SRALIPVVLL IAAVLGSIYT
GIATATEAAA VGVVGSLALS AAQGSLNWAS FRDALMGATR LYCMIALILA GAAFLTLAMG
YIGLPRHLAE WISSLGLSQA QLVVALAVFY IVLGCFLDGI SMVVLTMGVL MPTVSAAGID
PIWFGIFVVL VVEMAQITPP VGFNLFVLQG MTGKQLPWIA RVTAPMFLLM CAAVTLIYVF
PGIVTWLPQQ MTAR
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