| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2483 |
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| Symbol | |
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| ID | 4673087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2645950 |
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| End bp | 2646927 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839551 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_986720 |
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| Protein GI | 121594824 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0131179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC GAAACCTTGT CGCCGTTGCA CTGGCTGCCC TCACCGGCCT GTGCGCCCCC
GCCCTGCATG CCCAGACCAA GTGGGACCTG GCCGCCGCCT ACCCGGCCAC CAATTTCCAC
ACGGAGAACC TGGCGCAGTT CATCAGCGAC GTGGACAAGG GGTCAGGAGG CAAGCTCAAG
ATCACGCTGC ATGCCAACGC CGCACTGTTC AAGGCGCCCG AGATCAAGCG CGCCGTGCAG
GGCGCGCAGG CGCAGCTCGG CGAGATCCTG CTCGCCAACT TCCAGAACGA ATGGCAGATC
TTCGGCGTGG ACGGCCTGCC CTTCCTGGCC GACAGCTACG ACGCGTCGAT GAAGCTGTAC
AAGGCGCAAA AGCCGTTCCT GGAGAAGAAG CTGGCCGAGC AAGGCATGGT GCTGCTGTAC
GCCGTGGCCT GGCCGCCACA GGGCATCTAC ACCAAGAAGC CCGTGAACAA CGCCGCCGAC
CTGAAGGGCA TCAAGTGGCG CGCCTACAGC CCCGCCACCG CGCGCATCGC CGAGCTGGTG
GGCGCGCAGC CGGTGACGGT GCAGGCCGCC GAGTTCTCGC AAGCGCTCGC CACCGGCGTG
GTGGAGTCCA CCATGACCTC GGGCGCGACG GGCGTGGACA GCAAGCTCTA CGAGCACCTC
AAGTATTACT ACGACACCCA GGCCTGGCTG CCCAAGAACG CGCTCATCAT GAACAAGAAG
GCGTTCGATG CGCTGGACAA GCCCGTGCAG GAAGCCGTGC TCAAGGCCGC CGCCGACGCG
GAGACCCGCG GCTGGGCCGC CAGCCGCCGC GTGAACGAGG ACACGTTGGC CAAGCTCAAG
GCCGAGGGCA TGCAGGTAGT GCCGCCCAGC AGCCAGCTGA AGGCCGACAT GGCCAAGGTG
GGCGACACCA TGCTCAAGGA ATGGCTGGAC AAGGCCGGGC CCGACGGCAA GGCGCTGATC
GACGCCTACC GCAAGTAA
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| Protein sequence | MKRRNLVAVA LAALTGLCAP ALHAQTKWDL AAAYPATNFH TENLAQFISD VDKGSGGKLK
ITLHANAALF KAPEIKRAVQ GAQAQLGEIL LANFQNEWQI FGVDGLPFLA DSYDASMKLY
KAQKPFLEKK LAEQGMVLLY AVAWPPQGIY TKKPVNNAAD LKGIKWRAYS PATARIAELV
GAQPVTVQAA EFSQALATGV VESTMTSGAT GVDSKLYEHL KYYYDTQAWL PKNALIMNKK
AFDALDKPVQ EAVLKAAADA ETRGWAASRR VNEDTLAKLK AEGMQVVPPS SQLKADMAKV
GDTMLKEWLD KAGPDGKALI DAYRK
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