Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2469 |
Symbol | rpsA |
ID | 4672101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2629014 |
End bp | 2630699 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639839537 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_986706 |
Protein GI | 121594810 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.327946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.369216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT CTTTTGCCGC CCTTTTTGAA GAGTCGTTGA CACGCACCGA AATGCGTCCC GGCGAAGTCA TCACCGCTGA AGTCGTGCGC GTGGAGCACA ACTTCGTCGT GGTGAACGCT GGCCTGAAGT CGGAAGCCTA TGTGCCGATC GACGAATTCA AGAACGACCA GGGCGAGATC GAAGTCCAAG TGGGCGACTT CGTGTCCGTG GCCATCGGCT CGATCGAAAA CGGCTACGGC GACACCATCC TGTCGCGCGA CACCGCCAAG CGTCTGGCCT CCTGGCTGTC GCTGGAGAAG GCGCTGGAAT CCGGCGAATT CGTGACCGGC ACGACCTCCG GCAAGGTCAA GGGCGGCCTG ACGGTGCTGG TCAACGGCAT CCGCGCCTTC CTGCCCGGTT CGCTGATCGA CACCCGTCCC GTCAAGGACC TGACTCCGTA CGAAAACAAG ACCCTGGAGT TCAAGGTCAT CAAGCTGGAC CGCAAGCGCA ACAACGTGGT GCTGAGCCGC CGCGCCGTGG TGGAAGCCTC CATGGGCGAA GACCGCGCCA AGCTGATGGA AACGCTGAAG GAAGGCGCCA TCGTCAACGG CGTGGTCAAG AACATCACCG AATACGGTGC GTTCGTGGAC CTGGGCGGCA TCGACGGCCT GCTGCACATC ACCGACATGG CATGGCGCCG CGTGCGCCAC CCCTCCGAGG TGGTCACCGC CGGCCAGGAA ATCACGGCCA AGATCCTCAA GTTCGACACC GAGAAGAACC GCGTCTCGCT GGGCCTCAAG CAAATGGGCG ACGACCCGTG GCTGGGCGTA TCGCGCCGCT ACCCCTCGGG CACGCGCCTG TTCGGCAAGG TCACGAACAT CGCCGACTAC GGTGCGTTCG TCGAGCTGGA GCCCGGCATC GAAGGCCTGG TGCACGTCTC CGAAATGGAC TGGACCAACA AGAACGTGGC TCCTTCCAAG CTCGTGTCGC TGGGTGACGA AGTCGAAGTC ATGGTCCTGG AGATCGACGA AGACAAGCGC CGCATCAGCC TGGGCATGAA GCAGTGCAAG GCCAACCCCT GGCAAGAATT CGCGCAGGAC ACCAAGCGCG GCGACCGCGT CAAGGGCCCG ATCAAGTCGA TCACCGACTT CGGCGTGTTC GTGGGCCTGG CTGCCGGCAT CGACGGCCTG GTGCACCTGT CCGACCTGTC CTGGAACGAG CCCGGCGAAT CCGCCGTGCG CAACTACAAG AAGGGCCAGG AAGTCGAGGC GATCGTGCTG GCCGTGGACG TGGACCGCGA GCGTATCTCC CTGGGCATCA AGCAGCTCGA CGGCGACCCG TTCACCACCT TCGTGACGGT GAACGACAAG GGCCAGACGG TGACCGGCAA GGTCAAGACC GTGGACGCCC GTGGCGCCGA GATCGATCTG GGCGAAGACA TCGTGGGCTA CCTGCGCGCT TCGGAAATCT CCCGCGACCG CGTGGAAGAT GCCCGCAACG TGCTGAAGGA AGGTGACGAG GTCACGGCCG TGGTGGTGAA CGTGGATCGC AAGACCCGCA ACATCCAGCT GTCCATCAAG CAAAAGGACA TGGTTGACCA GCAGGAAGCC ATGGCGCACC TGTCAGCCCA GTCCGCGAAG GAAAACGCCG GTACCACCAG CCTGGGCGCC CTGCTGCGCG CCAAGCTGGA CAACTCCGAC AAGTAA
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Protein sequence | MSESFAALFE ESLTRTEMRP GEVITAEVVR VEHNFVVVNA GLKSEAYVPI DEFKNDQGEI EVQVGDFVSV AIGSIENGYG DTILSRDTAK RLASWLSLEK ALESGEFVTG TTSGKVKGGL TVLVNGIRAF LPGSLIDTRP VKDLTPYENK TLEFKVIKLD RKRNNVVLSR RAVVEASMGE DRAKLMETLK EGAIVNGVVK NITEYGAFVD LGGIDGLLHI TDMAWRRVRH PSEVVTAGQE ITAKILKFDT EKNRVSLGLK QMGDDPWLGV SRRYPSGTRL FGKVTNIADY GAFVELEPGI EGLVHVSEMD WTNKNVAPSK LVSLGDEVEV MVLEIDEDKR RISLGMKQCK ANPWQEFAQD TKRGDRVKGP IKSITDFGVF VGLAAGIDGL VHLSDLSWNE PGESAVRNYK KGQEVEAIVL AVDVDRERIS LGIKQLDGDP FTTFVTVNDK GQTVTGKVKT VDARGAEIDL GEDIVGYLRA SEISRDRVED ARNVLKEGDE VTAVVVNVDR KTRNIQLSIK QKDMVDQQEA MAHLSAQSAK ENAGTTSLGA LLRAKLDNSD K
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