Gene Ajs_2469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2469 
SymbolrpsA 
ID4672101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2629014 
End bp2630699 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content63% 
IMG OID639839537 
Product30S ribosomal protein S1 
Protein accessionYP_986706 
Protein GI121594810 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.327946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.369216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT CTTTTGCCGC CCTTTTTGAA GAGTCGTTGA CACGCACCGA AATGCGTCCC 
GGCGAAGTCA TCACCGCTGA AGTCGTGCGC GTGGAGCACA ACTTCGTCGT GGTGAACGCT
GGCCTGAAGT CGGAAGCCTA TGTGCCGATC GACGAATTCA AGAACGACCA GGGCGAGATC
GAAGTCCAAG TGGGCGACTT CGTGTCCGTG GCCATCGGCT CGATCGAAAA CGGCTACGGC
GACACCATCC TGTCGCGCGA CACCGCCAAG CGTCTGGCCT CCTGGCTGTC GCTGGAGAAG
GCGCTGGAAT CCGGCGAATT CGTGACCGGC ACGACCTCCG GCAAGGTCAA GGGCGGCCTG
ACGGTGCTGG TCAACGGCAT CCGCGCCTTC CTGCCCGGTT CGCTGATCGA CACCCGTCCC
GTCAAGGACC TGACTCCGTA CGAAAACAAG ACCCTGGAGT TCAAGGTCAT CAAGCTGGAC
CGCAAGCGCA ACAACGTGGT GCTGAGCCGC CGCGCCGTGG TGGAAGCCTC CATGGGCGAA
GACCGCGCCA AGCTGATGGA AACGCTGAAG GAAGGCGCCA TCGTCAACGG CGTGGTCAAG
AACATCACCG AATACGGTGC GTTCGTGGAC CTGGGCGGCA TCGACGGCCT GCTGCACATC
ACCGACATGG CATGGCGCCG CGTGCGCCAC CCCTCCGAGG TGGTCACCGC CGGCCAGGAA
ATCACGGCCA AGATCCTCAA GTTCGACACC GAGAAGAACC GCGTCTCGCT GGGCCTCAAG
CAAATGGGCG ACGACCCGTG GCTGGGCGTA TCGCGCCGCT ACCCCTCGGG CACGCGCCTG
TTCGGCAAGG TCACGAACAT CGCCGACTAC GGTGCGTTCG TCGAGCTGGA GCCCGGCATC
GAAGGCCTGG TGCACGTCTC CGAAATGGAC TGGACCAACA AGAACGTGGC TCCTTCCAAG
CTCGTGTCGC TGGGTGACGA AGTCGAAGTC ATGGTCCTGG AGATCGACGA AGACAAGCGC
CGCATCAGCC TGGGCATGAA GCAGTGCAAG GCCAACCCCT GGCAAGAATT CGCGCAGGAC
ACCAAGCGCG GCGACCGCGT CAAGGGCCCG ATCAAGTCGA TCACCGACTT CGGCGTGTTC
GTGGGCCTGG CTGCCGGCAT CGACGGCCTG GTGCACCTGT CCGACCTGTC CTGGAACGAG
CCCGGCGAAT CCGCCGTGCG CAACTACAAG AAGGGCCAGG AAGTCGAGGC GATCGTGCTG
GCCGTGGACG TGGACCGCGA GCGTATCTCC CTGGGCATCA AGCAGCTCGA CGGCGACCCG
TTCACCACCT TCGTGACGGT GAACGACAAG GGCCAGACGG TGACCGGCAA GGTCAAGACC
GTGGACGCCC GTGGCGCCGA GATCGATCTG GGCGAAGACA TCGTGGGCTA CCTGCGCGCT
TCGGAAATCT CCCGCGACCG CGTGGAAGAT GCCCGCAACG TGCTGAAGGA AGGTGACGAG
GTCACGGCCG TGGTGGTGAA CGTGGATCGC AAGACCCGCA ACATCCAGCT GTCCATCAAG
CAAAAGGACA TGGTTGACCA GCAGGAAGCC ATGGCGCACC TGTCAGCCCA GTCCGCGAAG
GAAAACGCCG GTACCACCAG CCTGGGCGCC CTGCTGCGCG CCAAGCTGGA CAACTCCGAC
AAGTAA
 
Protein sequence
MSESFAALFE ESLTRTEMRP GEVITAEVVR VEHNFVVVNA GLKSEAYVPI DEFKNDQGEI 
EVQVGDFVSV AIGSIENGYG DTILSRDTAK RLASWLSLEK ALESGEFVTG TTSGKVKGGL
TVLVNGIRAF LPGSLIDTRP VKDLTPYENK TLEFKVIKLD RKRNNVVLSR RAVVEASMGE
DRAKLMETLK EGAIVNGVVK NITEYGAFVD LGGIDGLLHI TDMAWRRVRH PSEVVTAGQE
ITAKILKFDT EKNRVSLGLK QMGDDPWLGV SRRYPSGTRL FGKVTNIADY GAFVELEPGI
EGLVHVSEMD WTNKNVAPSK LVSLGDEVEV MVLEIDEDKR RISLGMKQCK ANPWQEFAQD
TKRGDRVKGP IKSITDFGVF VGLAAGIDGL VHLSDLSWNE PGESAVRNYK KGQEVEAIVL
AVDVDRERIS LGIKQLDGDP FTTFVTVNDK GQTVTGKVKT VDARGAEIDL GEDIVGYLRA
SEISRDRVED ARNVLKEGDE VTAVVVNVDR KTRNIQLSIK QKDMVDQQEA MAHLSAQSAK
ENAGTTSLGA LLRAKLDNSD K