| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2460 |
|---|
| Symbol | |
|---|
| ID | 4671279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2616693 |
|---|
| End bp | 2617934 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639839528 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_986697 |
|---|
| Protein GI | 121594801 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.269087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.494365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCG ACAAGCAATG CAAAAACGCC ATCTGCCCAC CCGATAAGAA GCGAGCGCGC
TTCACTGACT CGCTTGGTCT GTACCTGGAG GTCAGCCCAT CTGGTTCCAA GCGGTGGTTC
TGGAAAACGT ACTTTGATGG CAAAGAGGGG CGAATGGCGC TCGGAAGCTA TCCCACTCAA
AGCTTGGCCG ATGCGCGCAA GGCTCGCGAT ATCGCCAAGT TGAAGAAGGC GGATGGCGTT
GATCCCGTTC AAGAACGTAA GCTTGAGAAG CTGAAGGGCT CCAGAAGTGG CGGAGACACC
TTTCAGGCCA TTGCGCTCGA ATGGCATGGC CGACAGGTTG ATCAATGGAG CGACACCCAT
GCAGGTCGCA CCAAGCGCCA ATTGGAGCGT GATCTATTCC CTTGGATTGG TGACCGGCAA
ATGACCAGCA TTGAGCCAAT GGAGTTGCTG GCGACACTTC AAAAAATTGA AGAGCGTGGC
GCCATGGAGA CGGCAGATCG GGCCTTGATG CTGTGCCGTC AGATTTGGCG CTACTGGTTG
CCCACGGCGG GGAACACTCA GCGTGATATC ACCGTTGGGT TGAAGAACCG ACTGACGCCG
TACCGGGGAA CAAACTTCCC AGCCATTGTT GAGCCAAAGC GGTTTGGCGA ATTGCTGCGG
GCAATGCATG TCTACAAAGG CAGTCACACC GTACGAACTG CGCTTTTGCT GGCACCTTTG
CTGTATCAAC GGCCTGGAAA TTTGCGTGCT ATGGAATGGG CTGAGGTGGA CCTCGATGCC
GCTCTTTGGA CAATCCCTAG TATGAAAATG AAGCGCACAA AGACCGAAAA AGAGCAGGGT
GAGCCGCATG CGGTTCCATT GCCAACACAG GCCGTAGAGC TGTTGCGAAA CCTGCAAGCG
TTGACGGGAC GTGGCACCTA CGTTTTCCCA GGACAGCGTG ATCATGAAAG GCCGATGTCC
GATAACTCGG TTCGCAGCGC GCTGTATTCA CTAGGGTTTG GAACGGAGCA GTCATGGCAT
GGCTTTCGAG CCAGCGCCAG GACAATGCTG GTTGATCAGC TGGATCTCGA TCCTTTGGCT
ATTGAAGCCA ATCTGGCGCA CGCGGTCAAA GACTCCAACG GGCGCAGCTA TAACCGGACT
CAGTATCTGA AAAAGCGGTA CGACCAAGTG CAGATGTGGG CAAATTACCT TGACCGGCTG
CGTTTGGGCG CGGAGGTTGT TCCTTTGGTG CGACAGGCGT GA
|
|---|
| Protein sequence | MLTDKQCKNA ICPPDKKRAR FTDSLGLYLE VSPSGSKRWF WKTYFDGKEG RMALGSYPTQ
SLADARKARD IAKLKKADGV DPVQERKLEK LKGSRSGGDT FQAIALEWHG RQVDQWSDTH
AGRTKRQLER DLFPWIGDRQ MTSIEPMELL ATLQKIEERG AMETADRALM LCRQIWRYWL
PTAGNTQRDI TVGLKNRLTP YRGTNFPAIV EPKRFGELLR AMHVYKGSHT VRTALLLAPL
LYQRPGNLRA MEWAEVDLDA ALWTIPSMKM KRTKTEKEQG EPHAVPLPTQ AVELLRNLQA
LTGRGTYVFP GQRDHERPMS DNSVRSALYS LGFGTEQSWH GFRASARTML VDQLDLDPLA
IEANLAHAVK DSNGRSYNRT QYLKKRYDQV QMWANYLDRL RLGAEVVPLV RQA
|
|---|
| |