| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2453 |
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| Symbol | |
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| ID | 4671324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2608143 |
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| End bp | 2609372 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639839521 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_986690 |
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| Protein GI | 121594794 |
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| COG category | [K] Transcription |
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| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.253954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.726571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAGGG CCGAAAACCC CGTTGCGGAC ATTGAGATCC GTGTAATTCG TAACGAGCGC
CAGTACGAGG AATGCCTGCA ATTGCTGCGC TCCCTCATGG CCTCTGCCAG CAACGGCGCC
AAGCCGAACG ATGAGCTGGA GCTATTGGCC ATGGTTCTTG AGCGTTACGA AGAAGAGCGC
TATGCACTCA CGTCCATCGA TCCGGTGGAC GCCATTGCTC TCAAGATGGC TGAGTTCGGC
TGGAGTCAAA AGGATTTGGC AACTGCGCTG GGAAGTGCTT CTCGCGCCTC CGAAATCCTC
AATCGCAAGC GTGCGCTGAG CATTGAGCAC ATCCGGGTGC TGCATCGTGA ACTGAAGATT
CCCGCCGAGG TGCTGATCGG CCAGTCCCAG CCCAGCGACA CGTTCACGGA CGAGGACCTT
AAGAAGCTGC CTCTGAAGGA GATGATTCGG CGTGGCTGGT TAGGCAGCCA ATCCCTGGAT
GCTCAGGGGG CCTTGGCACA GGTCAAAGAC TTTCTCGCAC GGGTGTCGCT CGGCGCGACG
CCTGTTTTCA TGCGTCGGTC AGTATACGGC GGGATCGACG AGAGCACGCG TCTGAGCACT
TACGCCTGGC TTTCCCGGGT CGTTTTGCGT GCACGCCAGG AACAGCGCCA TAGCACGCGG
TTCATTCCCA ACTCATTGTC GACGGAGTTT ATGCAGCAGG TTGCTAAGCT GAGCTGCACG
GACCAGGGGC CGGCCCTAGC GCAAGAGTTT CTGGCCATGA AGGGCATCTC ACTCGTGGTG
GAGCGAGAAC TTTCTGGCAT GAAGCTGGAC GGTGCGGTGG TTCGCGACGA CGACGGTTCG
CCCATCATCG GCATGACGTT GCGGCATGAT CGGCTGGATT CATTCTGGTT TACCTTGATG
CACGAGCTGG CCCACTTGCA AAGACATCTG GGGAGCCAAG CTATTGCCTT TGTAGATGAC
ATCGGCAATG TCGATTCAAC TGACCAGAGA GAGCGCGAGG CGGATGCGAT CGCTGCTGAA
GTCTTAATTC CGCGTGCCGT ATGGGGGCGC TCAGATGCGG CACGCCGTCG TACGGGTGAC
GCTATAGAGA GCTTGGCGAG TGAATTGCGG ATTAGCCCCG CCATCGTGGC CGGGAGGATC
CGGCGAGAAA CGAACAACTG GAAAATTCTG ACCAAGTACC TGGGTCAGGG CGAGGTTCGG
CGTCATTTCC CGAACGTTGT GTGGGACTAG
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| Protein sequence | MKRAENPVAD IEIRVIRNER QYEECLQLLR SLMASASNGA KPNDELELLA MVLERYEEER
YALTSIDPVD AIALKMAEFG WSQKDLATAL GSASRASEIL NRKRALSIEH IRVLHRELKI
PAEVLIGQSQ PSDTFTDEDL KKLPLKEMIR RGWLGSQSLD AQGALAQVKD FLARVSLGAT
PVFMRRSVYG GIDESTRLST YAWLSRVVLR ARQEQRHSTR FIPNSLSTEF MQQVAKLSCT
DQGPALAQEF LAMKGISLVV ERELSGMKLD GAVVRDDDGS PIIGMTLRHD RLDSFWFTLM
HELAHLQRHL GSQAIAFVDD IGNVDSTDQR EREADAIAAE VLIPRAVWGR SDAARRRTGD
AIESLASELR ISPAIVAGRI RRETNNWKIL TKYLGQGEVR RHFPNVVWD
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