| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2443 |
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| Symbol | |
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| ID | 4670981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2597939 |
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| End bp | 2599534 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839511 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_986680 |
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| Protein GI | 121594784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.45047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.859725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACCCA ACCAACGGGC CACCGTCTAC ACGCTGCTCG AGCGTGGCAG CACCCAGCGC
GAGATCGCGC GCATCACCGG AATCGACCGC AAGACCGTCA GGAGTTACCA ACGTCGCCGG
CAGGCCGAGC AGTCAAATTC CCCCGGGGTG GCCACCGGCC CTGATGCCAT GGCCGCTCAC
GTGGCCGCGC AAATTCCCCC ACCCTGGCCA CCGGCTCCCA CGTCAGTGGC CGCCTCCCTA
TGCGAGCCGT ACCGCGACTT CATCGAGGCC CAACTGCGTC TCAAGCGCAA CGCCACGGCC
ATCTACCAGG ACCTGGTCGA TGTCCACGGC TTTGCCGGCC AGTACAACTC GGTCAAACGC
TTCGTGGCCC GGCTGCGTCA CAAGGAGCCC GAACAATTCG ACCGCCTGTC CTTCCTGCCC
GCAGAGGAGA TGCAGGTGGA CTACGGTGAG GGTGCACCCA CCCGGGTGCC GGGCAGCAAC
CGGTACCGCA AACCGCGCCT GTTCGTGGCC ACGCTGCGCT ACTCGCGGGC CAGCTTTCGG
CACGTGGTCT GGAAGTCCAG CCAGCAGGTC TGGGCCGAGC TGCACGAGCG CGCGTTTCGC
CACTTCGGTG GCTGCCCGCA GTACGTGGTG CTGGACAACC TCAAAGAGGG CGTCATCAAA
CCCGACCTGT ATGAGCCCGA ACTCAACCCG GTCTATGCCG CCACCCTGGC GCACTACGGC
GTGGTGGCCG ACCCGGCCCG GGTGCGTGAC CCCAACCGCA AGGGTACGGT AGAGCACGCC
ATCGGCCACA CCCAGGCCAC GGCCTTGAAG GGCCGGCGCT TTGAGTCCAT CGAAGAGCAG
AACACCTTCC TGGCGCAATG GGAGAAGAAT TGGGCAGCCA AGCGCATCCA CGGCACCGAG
CGGCGCCAGG TGCAGGCCAT GTTCGCGGAA GAACGCCCCC ACCTCAAAGC TTTGCCACTG
CTGGGCATGC AGTATTTCGA AGAGGTCCAG CGCACGGTGT GCGACGACAG CTGTGTGCGG
GTGGAGCACA GCAGCTACGC CGCGCGCCCG GCGGTCATCG GATCGAAGGT GCGGGTGCGC
ATCTTCGCCC AGCGCATCCA GATCTTTGAT CTGCAAACCG GCACCTTGCT GCGCAGTCAC
CCCAAGGCTG AACGCCCCGG CACCGTGGTG CTGCCCCAGG ATGAGCGGGT GTTCAACCCC
TCGCGTGAGA CCCGCCTGAT CCTGCGCCAG GCCGGCCAGA TTGGCGAACA CGCCGCCCGG
CTGTGCCAGT TGCTCTTTGC CATCGAGGGC CGGGTGGGCC AGCGCAAGCT CTGGGGCATC
GTCGGCCTGG TGCGCCGATA TCCGGCGCAT TGTGTCAACG CCGCTTGCGC CCAGGCTCTG
GAGCAGGGCA TCTACAGCTT CAAGCGCGTC CAGGCATTGA CAGAGGCGCT CTTTGCCGAT
GCGCTTGAAG CCATCGAGAC CCAGGCCGGT GGCGAGCATG TAACGCCCAC CACGGCGACC
CTGACCCAGC AGCACGAGCT GATCCGCGAT GCCGATGAAT ACGGTGACCT GTTTGCCCAC
GCTGCGGCCA CCGCCGCAGT TGGGAGCCAG CCATGA
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| Protein sequence | MKPNQRATVY TLLERGSTQR EIARITGIDR KTVRSYQRRR QAEQSNSPGV ATGPDAMAAH
VAAQIPPPWP PAPTSVAASL CEPYRDFIEA QLRLKRNATA IYQDLVDVHG FAGQYNSVKR
FVARLRHKEP EQFDRLSFLP AEEMQVDYGE GAPTRVPGSN RYRKPRLFVA TLRYSRASFR
HVVWKSSQQV WAELHERAFR HFGGCPQYVV LDNLKEGVIK PDLYEPELNP VYAATLAHYG
VVADPARVRD PNRKGTVEHA IGHTQATALK GRRFESIEEQ NTFLAQWEKN WAAKRIHGTE
RRQVQAMFAE ERPHLKALPL LGMQYFEEVQ RTVCDDSCVR VEHSSYAARP AVIGSKVRVR
IFAQRIQIFD LQTGTLLRSH PKAERPGTVV LPQDERVFNP SRETRLILRQ AGQIGEHAAR
LCQLLFAIEG RVGQRKLWGI VGLVRRYPAH CVNAACAQAL EQGIYSFKRV QALTEALFAD
ALEAIETQAG GEHVTPTTAT LTQQHELIRD ADEYGDLFAH AAATAAVGSQ P
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