Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2441 |
Symbol | |
ID | 4671398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2595829 |
End bp | 2596410 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639839509 |
Product | TetR family transcriptional regulator |
Protein accession | YP_986678 |
Protein GI | 121594782 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.264842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.509096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGA GCAAAGCACA GGCCGCCGAG AATCGCGAAG GAATCGTGAA AGCCGCTGCG CGCCTTTATC GGGAGAAGGG CCTGGATGGC GTGGGCGTGG CCGAGATCAC ACGCGATGCA GGCTTGACGC ACGGCGGGCT GTACCGACAC TTTGAGTCCA AGGATGCGCT CGCGCGCGAG GCGTGCCTGC GTGCATTTGA GTGGACGATC ACGCCGCTAG ACGGATGGGA GCCTCGGGAG GCGGAAGGTG CGCCTGAAAC CAGACTCCGT GCGCTGGTGC ATGGCTACCT TTCTGTGAAC CACCGCGATC ACCCTGGAGA GGGTTGCCCT GCTGCGGCAT TGGCAGCGGA TGCTGCAAGA GCGGGGCCTG AGATGTCAAA GGTTTTTGCG CAGGGGGTGG AGCGCAACAT CCACCGCTTT ATGAGCGTGC TCCCGGGTAA TGACGGGGCC AAGCGTGCCC GGACTATCGC GACCCTCAGC AGCATGGTTG GGGCATTGGT TCTCGCCCGC GCCACGGCGG CAGGCGACCC GGCGCTGTCT GAAGAAATAT TGGCAACCTT GCGGGAGCAG CTAGCCCCGT AG
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Protein sequence | MKVSKAQAAE NREGIVKAAA RLYREKGLDG VGVAEITRDA GLTHGGLYRH FESKDALARE ACLRAFEWTI TPLDGWEPRE AEGAPETRLR ALVHGYLSVN HRDHPGEGCP AAALAADAAR AGPEMSKVFA QGVERNIHRF MSVLPGNDGA KRARTIATLS SMVGALVLAR ATAAGDPALS EEILATLREQ LAP
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