| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2428 |
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| Symbol | |
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| ID | 4671377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2582635 |
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| End bp | 2585202 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639839496 |
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| Product | helicase c2 |
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| Protein accession | YP_986665 |
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| Protein GI | 121594769 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.376304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.732574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCG CCCCGCGCCC CCACGTGGTG GCCGTGCGCG CGCTGTGCGA GTTCACGGCC
CGCACGGGCG ACCTGGACCT GCGCTTCACC CCCGCTCCCA GCGCCCTTGA GGGCATGGAA
GGCCACCGCG CCGTGCAGCA GCGCCGGGGC GCCGGCTACG AGGCCGAGGT GCCCCTGAGC
GGCACGTACG ACCACCTGAC GGTGCGCGGC CGTGCCGATG GGTGGAACGC AGCGTTGGGG
CAGCTTGAAG AAATCAAGAC CTACCGCGGC ACGCTGGACA GCGTGCGCCC CCACCACCGC
GCGCTGCACT GGGCCCAGGC CCAGGTGTAC GGCCACCTGC TGTGCCAGGC GCGCGGGCTG
GCGGGGCTCA AGCTCGCGCT GGTCTACGTG CACGCCACCA CCCATGCCGA GACCGTGCTG
GTGCAAGAGA ACACCGCCGC CGCGCTGCAG GCGTTCTTTG CCACGCAGTG CCAGCGTTAC
CTGGCTTGGG CGCACAGCGA AGCCGCGCAC CGCCAGCAGC GCAACGCGGC CCTGGCGCTG
CTGCGTTTTC CGCTGCCCGC GTTCCGCGCC GGGCAGCGCG ACCTGGCCGT GGCCGTGTAC
CGCACCGCGC ACCCCAACGC AGAGGGTGCC AGCGCCCCCG CCGGGCGTTG CCTGCTGGCC
CAGGCGCCCA CCGGCATCGG CAAGACCCTG GGCACGCTGT TCCCGCTGCT CAAGGCTATG
GCGCCCCCGG CTATGGCGCC CCCGGCAATA GCCGCGCCAG GGCAGGGCAG GCCTGCTCCG
GCCGCTGCCG CATCCGGCGC CGCCGCCGAT GCGGTGGCCA ACGGGGACAC GGAAACCATC
AAAAAAGAGA GCGCGCCACG CTTGCCCAGC GGGCTGGACA AGCTGTTTTT CCTCACCGCC
AAGGGCACGG GCCACGGCCT GGCGCTGCAC GCGCTGGCCC AGTTGCAGGG CGCGCTGGCC
CCGCACGCGC CCGGCACGCC GCTGCGCGTG CTGGACCTGC ACGCGCGCGA CAAAACCTGC
GAACACCCCG GCAGCGCCTG CCATGGCGAC GCCTGCCCGC TGGCGCGCGG CTTCTTTGAC
CGGCTGCCCG CCGCCCGCGC CGCCGCCGTG CAGCAGCCGG CGCCCTGGGA CGCCCCCACC
GTGCGCAGCG TGGCGCTGCA GCACGGCATC TGCCCCTACT ACCTGTCGCA AGAGCTGGTG
CGTTGGGCCG ACGTGGTGGT GGCCGACTAC CACTACTACT ACGACAGCGC CGCCATGCTC
TACGCCCTCA CGCAGCAGCA GGGCTGGCGC GTGGCCGTGC TGGTGGACGA GGCCCACAAC
CTGCTGGAGC GCGCACGCAG CATGTACACC GCGCCGCTCT CGCCCTTCGA GCTGGCCGCC
GCACGCCAGG CCGCCACCGG CCCCGTGAAG AAGGCGCTCG ACGCGCTGCA CCGCCAGTGG
AACGCGCTGA ACAAGACCGT GGGCCAGGCC GCAGAAGACG CTGGCACGCC AGGCGCACCC
GGCGCATCGC ACGCCGGCGC CACCGCACCC GCGCGCCCCA TCGCCGCCAC GCCCAGCTAC
CAGGCCCACA CCACCGTGCC GCCCGCGCTG CTGGGCGCCG TGCAGCGCGC CGTAGGCGCC
ATGGCCGAGG CCCAGGCCGA CCAACCCCTG CCGCCGGGCG ACGCGGTGCT GGCGTTCTAC
TGGTCGCTGC TGCACTTCCA GGCCCTGGCC GAGCAGTTCG GCACGCATGC GCTGTTCGAC
CTGCAGCGCA CCGCCACGCC ACCGCGCAGC CGCAGCGGCC GGGCCCGCAC ACCCGCCACC
ACGCTGAGCA TCCGCAACGT CATGCCCGCA CCGCACCTGG CGGCGCGCCA CGCGGCAGCG
CAGGCCACGG TGCTGTTCTC GGGCACGCTC AGCCCGCCGC AGTTCTACCG CGACCTGCTG
GGCCTGCCGC CCGACACCGT CTGGCTGGAC GTGGCCGCCC CCTTTGCCGC CCACCAGCTG
CAGGTGCGCG TGGCCCCGCA CATCTCCACC CGCTGGCGCG ACCGCGAGGC CTCGCTCGCC
CCCATCGCCG ATCTGGTGGC CGCGCAGTAC GCGCACCAGC CCGGCAACTA CCTGTGCTTT
GCCAGCAGCT TCGACTACCT GCAGCGCGTG GCCGCCACCC TGGCCCAGCG CCACCCGCAG
GTGCCCCAAT GGCAGCAAAC GCGCGAGATG GACGACGCCA GCCGCGCCGC CTTCCTCGCC
CGCTTTACCG AGGGCGGCCA GGGCGTGGGC CTGGCCGTGC TGGGCGGCGC CTTTGCCGAA
GGCGTGGACC TGCCCGGCAC CCGCCTCATC GGCGCCTTCA TCGCCACGCT GGGCCTGCCG
CAAGTGAACG CGGTGAACGA CGCCATGCAA TGTGCGCTGG ACGAGGTGAT GGGCCCTGGC
CAGGGCTATG CCTGCACCTA CCTGTACCCC GGCCTGCGCA AGGTGGTACA GGCCGCCGGC
CGCGTGATCC GCACCGAACA CGACAAGGGC GTGGTGGTGC TGATGGACGA CCGCTTTCAG
CGTGCAGAGG TGCGCGCGTT GTTGCCACGG TGGTGGCAGG TGGGGTGA
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| Protein sequence | MTAAPRPHVV AVRALCEFTA RTGDLDLRFT PAPSALEGME GHRAVQQRRG AGYEAEVPLS
GTYDHLTVRG RADGWNAALG QLEEIKTYRG TLDSVRPHHR ALHWAQAQVY GHLLCQARGL
AGLKLALVYV HATTHAETVL VQENTAAALQ AFFATQCQRY LAWAHSEAAH RQQRNAALAL
LRFPLPAFRA GQRDLAVAVY RTAHPNAEGA SAPAGRCLLA QAPTGIGKTL GTLFPLLKAM
APPAMAPPAI AAPGQGRPAP AAAASGAAAD AVANGDTETI KKESAPRLPS GLDKLFFLTA
KGTGHGLALH ALAQLQGALA PHAPGTPLRV LDLHARDKTC EHPGSACHGD ACPLARGFFD
RLPAARAAAV QQPAPWDAPT VRSVALQHGI CPYYLSQELV RWADVVVADY HYYYDSAAML
YALTQQQGWR VAVLVDEAHN LLERARSMYT APLSPFELAA ARQAATGPVK KALDALHRQW
NALNKTVGQA AEDAGTPGAP GASHAGATAP ARPIAATPSY QAHTTVPPAL LGAVQRAVGA
MAEAQADQPL PPGDAVLAFY WSLLHFQALA EQFGTHALFD LQRTATPPRS RSGRARTPAT
TLSIRNVMPA PHLAARHAAA QATVLFSGTL SPPQFYRDLL GLPPDTVWLD VAAPFAAHQL
QVRVAPHIST RWRDREASLA PIADLVAAQY AHQPGNYLCF ASSFDYLQRV AATLAQRHPQ
VPQWQQTREM DDASRAAFLA RFTEGGQGVG LAVLGGAFAE GVDLPGTRLI GAFIATLGLP
QVNAVNDAMQ CALDEVMGPG QGYACTYLYP GLRKVVQAAG RVIRTEHDKG VVVLMDDRFQ
RAEVRALLPR WWQVG
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