Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2423 |
Symbol | |
ID | 4671370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2573488 |
End bp | 2574534 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639839491 |
Product | polysulphide reductase, NrfD |
Protein accession | YP_986660 |
Protein GI | 121594764 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00497953 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATCA TCGAACTCCT GACCCCGCAC TACGAGGCGG CCTGGCTGCC CTGGGCCGTG CAGTACTTCT TCCTGGTCGG CGTGGCCACC GGCGCCGCCA TCCTGGCCGC GCTGTGCGCC TGGGGCAAAG ACGGCGGCAC GCTGCAGCGC CTGCTGCCCG CGGCCGTGCT GACGCTGGCC GTCAGCAGCA TTGCGGCCCC CGTGTCGCTG CTGGCCGACC TGCACCAGCC CGCGCGCTTC TGGCACTTCT ATGCGCACTT CACGCCCTGG TCGTGGATGT CGGTCGGCGC GCTGCTGCTG CCGGTGTTCG TCACGCTCAG CGTGGCGATG TGCGCCGCCT GGTGGCTGGG CAAGACCGGC TGGATGCGCC TGCTGGCGCA GCTGCTCTTG CTCTCTGCGC TCACCATTTC GGTCTATACC GGCGCCGAGA TGATGGTGGT GCGCTCGCGC CCGCTGTGGA ACACGCTGTG GGTGCCCGTC AACCTGGCGC TGACCGGCTG GCTGGCCACC GTGGGCGCGG CCTTCGTGCT GGAGCGCTTT CTGCCCGCCA CGCTGCGCCC CGGCGCTGAA GCGCTGCAAA CGCTGCGCGG CATGGGCCTG GCGCTGGCCG GCGCGCTGCT GGTGGTGGCG CTGGCCTGGG CCGCGAGCGG CTTGGGCGGC GACAGCCCCT CGTTCAACGC CGCACTGCGC CTGTGGAACG ACTTCCCCGT GTGGCGCCTG ACGATGATCG GCTCGGCCAT CGGGGGTGCC GCCGTGCTGG GGGCGCTGCT GCGCGGGCGC CACCGCCTGC ATGCCAAGGG CTACACGCTG GTGCTGGGCC TGGGGCTGGC CGCCGCCGCC TGGGCCTTCC GCTGGGCGCT GTTCATGGGC GTGCAGGGCG TGCCGAAGTT CGGCGCCGGC CTGTACCTGT ACCACATGCC TCTGGGCGGC GACGGGCTGC TGGGCATGGT GGGTGTGGCG GGCCTGTGCG TGGCACTGGT CGGGCTGGCG AGCTGGGCGC TGGAGCTGTT CCCGGCCCGC AAGGCACCCA CGGCCACTGC CGCCTGA
|
Protein sequence | MQIIELLTPH YEAAWLPWAV QYFFLVGVAT GAAILAALCA WGKDGGTLQR LLPAAVLTLA VSSIAAPVSL LADLHQPARF WHFYAHFTPW SWMSVGALLL PVFVTLSVAM CAAWWLGKTG WMRLLAQLLL LSALTISVYT GAEMMVVRSR PLWNTLWVPV NLALTGWLAT VGAAFVLERF LPATLRPGAE ALQTLRGMGL ALAGALLVVA LAWAASGLGG DSPSFNAALR LWNDFPVWRL TMIGSAIGGA AVLGALLRGR HRLHAKGYTL VLGLGLAAAA WAFRWALFMG VQGVPKFGAG LYLYHMPLGG DGLLGMVGVA GLCVALVGLA SWALELFPAR KAPTATAA
|
| |