Gene Ajs_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2408 
Symbol 
ID4671352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2559768 
End bp2560178 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content66% 
IMG OID639839476 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_986645 
Protein GI121594749 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.692692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.803966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG GAACCCAGGA CGATGCCGAC GAGGTGATGA ACGAAATCAA TATGACGCCG 
CTGGTGGACG TCATGCTGGT GCTGCTCATC ATCTTCATCA TCACCGTGCC GGTGATGAAG
CACGCCGTGC CGGTGGACCT GCCGCGTGCG TCCAACGAGC GCGAAATCAT CAAGCCCGAA
ACCATCCGCC TGTCGGTGAC GGCCGACGGC AAGTACCACT GGAACGAGAC CACGATCGGC
GACGACGAAC TGGAGCCGCG CCTGCAGGCC GAGGCCCGCA AGGACCCGCA GCCGGACCTG
CACATCCGCG GCGACAAGGA CGTGCGCTAC GAGCGCGTGG CGCAGGCGAT GTCGGCGGCG
CAACGCGCGG GCGTGCGCAA GATCGGCTTC GTGACCGACC CGGCGCCCTG A
 
Protein sequence
MAFGTQDDAD EVMNEINMTP LVDVMLVLLI IFIITVPVMK HAVPVDLPRA SNEREIIKPE 
TIRLSVTADG KYHWNETTIG DDELEPRLQA EARKDPQPDL HIRGDKDVRY ERVAQAMSAA
QRAGVRKIGF VTDPAP