| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2404 |
|---|
| Symbol | |
|---|
| ID | 4671437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2557469 |
|---|
| End bp | 2557759 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639839472 |
|---|
| Product | SWIB/MDM2 domain-containing protein |
|---|
| Protein accession | YP_986641 |
|---|
| Protein GI | 121594745 |
|---|
| COG category | [B] Chromatin structure and dynamics |
|---|
| COG ID | [COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.609198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG CAAAGACCGC GTCCGCAGCA CCCGCAAAGA AGCGCACCCC CAACGCCGCT
TTCATGAAGC CCCTGACCCC CAGCCCCGCT CTGGCGGCCG TGGTCGGCGC CACCCCGCTG
CCGCGCACGG AGATCATCAG CAAGCTGTGG GTGTACATCA AGGCGCACAA CCTGCAGGAC
GCCTCCAACA AGCGCATGAT CAACGCGGAT GCCAAGCTCA AGGAAGTGTT CGGCAAGCCC
CAGGTCTCGA TGTTCGAGAT GGCCGGCCTG ATTGGCAAGC ACGTCAAGTA A
|
|---|
| Protein sequence | MATAKTASAA PAKKRTPNAA FMKPLTPSPA LAAVVGATPL PRTEIISKLW VYIKAHNLQD
ASNKRMINAD AKLKEVFGKP QVSMFEMAGL IGKHVK
|
|---|
| |