Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2400 |
Symbol | thrS |
ID | 4671495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2551921 |
End bp | 2553840 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639839468 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_986637 |
Protein GI | 121594741 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.459202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCACA TTACGCTTCC CGACGGTTCC CAGCGAGAGT TTGCTGGTCC CGTGACTGTG GCGGAGGTGG CTGCCTCCAT CGGTTCGGGC CTGGCCAAAG CGGCGCTCGC CGGCAAGATC GGGGACAAGG TGGTGGATAC CAGCTACCAG ATCACGCAAG ACAGCCCGCT GTCCATCGTG ACGGCCAAGG ATGCCGACGG CCTGGAGGTG ATCCGCCACT CCACGGCCCA CCTGCTGGCC TATGCGGTCA AGGAACTGTT TCCCGATGCG CAGGTGACCA TCGGGCCGGT GATCGAAAAC GGCTTCTACT ACGACTTCTC GTACAAGCGT CCGTTTACGC CGGAAGACTT GGCCGCCATT GAAAAGCGCA TGGCGGAACT GGCTGCGAAG GATGAACCAG TGGTGCGCCG TGTATTGCCT CGGGACGAGG CGGTGGCGTA CTTCAAGGGC CTGGGCGAAC ACTACAAGGC CGAGATCATT GCCAGCATCC CGACGAATGA GGACGTGAGC CTGTACCGCG AGGGCGGCTT TGAAGACCTG TGCCGTGGCC CCCACGTACC CAGCACCGGC AAGCTCAAGT TCTTCAAACT CATGAAGGTG GCGGGCGCCT ATTGGCGCGG CGACCACCGC AACGAGATGC TCCAGCGCAT CTATGGCACG GCATGGGCCA CGAAGGAAGA ACTGCAGGAG TACCTGCACA TGCTGGAAGA GGCCGAGAAG CGCGACCATC GCAAGCTGGG CCGTGAGCTT GACCTGTTCC ACATCGACGA ACATTCGCCT GGTACCGTGT TCTGGCACCC CAAGGGCTGG ACGCTGTGGC AGGAGGTGGA GCAGTACATG CGCCGCGTAT ACCGCGACAA CGGCTACCAG GAGGTCAAGG GCCCGCAGAT CCTGGACAAG ACGCTGTGGG AAAAAACGGG ACACTGGGAC AAGTACCGCG ACAACATGTT CACCACTGAG AGTGAGAAGC GCGACTACGC TCTCAAGCCG ATGAACTGCC CGGGCCATAT CCTGATCTTC AAGCAGGGCA TCAAGAGCTA CCGCGACCTG CCGCTGCGCT ACGGCGAGTT CGGCCAGTGC CACCGCAACG AGCCCACGGG TGGCCTGCAC GGCATCATGC GCGTGCGCGG TTTCACGCAG GACGATGGTC ACATCTTCTG CACGGAAGAC CACATCCTGG CCGAATGCAC AGCTTACACA GCGTTGCTGC AAAAGGTCTA CAAGGACTTC GGCTTCCACA ACATCATCTA CAAGGTGGCC ACGCGCCCCG AAGCACGCAT CGGTTCCGAC GAGAGCTGGG ACAAGGCCGA GCATGCGCTG ATGGAAAGCC TGCGCGCGTC GGGTTGCGAA TTCGAGATCG CTCCCGGCGA TGGCGCCTTC TATGGCCCGA AGATCGAGTA CACGCTCAAG GACGCGATCG GACGGCAGTG GCAGTGCGGC ACCATGCAGG TGGACTTCTC GATGCCCGAG CGGCTGGATG CAGAGTACGT GGGCGAGGAT GGCGGGCGCC ATCGGCCGGT GATGCTGCAC CGCGCCATCG TGGGCAGCCT GGAGCGCTTC ATCGGCATCC TGATCGAAGA ACACGCCGGG GCCTTGCCCG TTTGGCTTGC GCCCGTACAG GTGGCGGTGC TCAATATCAC CGACGCGCAG CAGGATTACT GTCGTGAAAT CGCCGCAAAG CTGCAAAAAG CGTTGCCGAA TCAAGGCCTT AGGGTGGTGA CTGATCTGCG TAACGAGAAG ATTACGTATA AAATACGGGA GCATTCGCTG CAAAAGCTGC CCTACATCCT CGTCGCCGGC GACAAGGAAA AGGCTGCAGG GGCTGTGGCA GTGCGTGCCC GGGGTAACAA AGACCTCGGC GTGATGTCCC TCGACGCATT CGTCGATCTG ATCGCGCAGG ACATTGCCTC CAAAGTCTGA
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Protein sequence | MIHITLPDGS QREFAGPVTV AEVAASIGSG LAKAALAGKI GDKVVDTSYQ ITQDSPLSIV TAKDADGLEV IRHSTAHLLA YAVKELFPDA QVTIGPVIEN GFYYDFSYKR PFTPEDLAAI EKRMAELAAK DEPVVRRVLP RDEAVAYFKG LGEHYKAEII ASIPTNEDVS LYREGGFEDL CRGPHVPSTG KLKFFKLMKV AGAYWRGDHR NEMLQRIYGT AWATKEELQE YLHMLEEAEK RDHRKLGREL DLFHIDEHSP GTVFWHPKGW TLWQEVEQYM RRVYRDNGYQ EVKGPQILDK TLWEKTGHWD KYRDNMFTTE SEKRDYALKP MNCPGHILIF KQGIKSYRDL PLRYGEFGQC HRNEPTGGLH GIMRVRGFTQ DDGHIFCTED HILAECTAYT ALLQKVYKDF GFHNIIYKVA TRPEARIGSD ESWDKAEHAL MESLRASGCE FEIAPGDGAF YGPKIEYTLK DAIGRQWQCG TMQVDFSMPE RLDAEYVGED GGRHRPVMLH RAIVGSLERF IGILIEEHAG ALPVWLAPVQ VAVLNITDAQ QDYCREIAAK LQKALPNQGL RVVTDLRNEK ITYKIREHSL QKLPYILVAG DKEKAAGAVA VRARGNKDLG VMSLDAFVDL IAQDIASKV
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