| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2380 |
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| Symbol | |
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| ID | 4672635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2530052 |
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| End bp | 2532322 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839447 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_986617 |
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| Protein GI | 121594721 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTACAAA TCAGGATTTC CAACGTCACC ATCTTCGGAC TGCTGTCCAT GTCGCATCCG
TCCACCGCCC TGGCGCAGGA CCCAGGGCAG GTTTCTCCCG GGGCGATGCA GCGCGTCCTG
CGCGAACAGC AGACCTTGCT GGACAGCGCG GGTGTCGGGA TCGTGTTCAT TCGCAACCGC
GCTTTGGTGC GGTGCAACCA GCGCTGCGCC GAGATCTTCG GGCTACCCTC GCCCGAAGAC
GCGATTGGCC GAAGCAGCGA AGCCCTGCAC CCAAGCCGGG GAGCGTTCCG CGAACTCGGC
CGCGCCGCTT ATCCGACCCT CGCGCGCGGT CAGGCGTATC GCACGGAGCG CCAGCTGAAA
CGCTGCGACG GCCAACTGTT CTGGGCGCAC CTCACCGGGC GATTGATCAA CCCCCGGGAC
AGCCGCGAAG GGTCCATCTG GATCATCGAC GACATCGACG AGCAAAAGCG CGCTCAGGCG
CAGTTGCAGG CGGCCTTGTG GGAAAAGCAG GTGCTGTTCG ACAGTGCCAT GGTGGGCATC
GTCTTCCTGC AAGAGCGGCG CATGACACGG TGCAACCGCC ATTTCGAGCA GATCCTGGGG
TACGGCCCGG GCGAACTGGC AGGGTCCTCG TCGCGGCGGT GGTATTTGAG CGACGAAGAC
TGGCACGAGG CCGGGGTGCG CTGCTATGCG CCGCTGGTGC AGGGACAGGC CTTCGAAGGC
CAGATGGTCT TGCGCACCCG CGATGGGCGC GCCATTGAAT GTGAGGTACG CAGCAAGGCC
GTCGATCCGT CGAATGTCGC GCAGGGCTCC ATCTGGATCG TGATGGATGT GAGCGAGCGA
TTGCGCATTC AGAGGCAGCT CGCGGGCATG CATGGCGAAC TGGAGCAGCA AGTGCGCGAC
CGCACGCGCG AGTTGCAGGA GACAGTGGGC AACCTGCACC GCGAGATCCA GGACCGTCAA
CGCGACCAGG AACGTATCTA CTGGATGGCG CACTACGACG CGCTCACCGA ACTGCCCAAC
CGCGTCCTTC TGGCCGAGCG CGGTCAGGAC GCGATCCGCC AGGCGCAAGA GTCCGGTGCG
CCCCTGGCCG TGATGTTCCT GGACTTGGAC AACTTCAAGC ACGTGAACGA CTCGCTGGGC
CATCGCATCG GCGATGCACT GTTGGTGGAA ATCGCACAGC GCCTGCGCAC CACGGTGCGG
CAAAGGGACA CCGTGGCGCG TCTAGGGGGT GACGAGTTCG TGCTCCTGCT ACCCGGCGCC
AACGCGCAAG GCGCCGCGCG GGTGGCGGCC AAGATGCAGG AAGCAGCCCT GCAGCCGGTG
CACATCCAGC ACCATGAATT GTCGCTGGCC CTGTCCATGG GGATTGCGCT CTTTCCTGAG
CATGGGAGCG ATTTCGAGAC CCTGATCCAG TCGGCCGATA CCGCGATGTA CCGCGCCAAG
GCGGACGGAC GCAACAGCTT CCGGTTCTTC ACGCCCACGA TGCAGGCGCA GTCGGCCCGA
GCGCTGCAGT TGACCAACGC GCTGCGGCGG GCTCTGGAGC GCAACCAGTT GTCGCTGCAT
TACCAACCCC AGGTGTCCAT CGCGACGGGC CGGGTCTGCG GCGTGGAGGC GCTGCTGCGC
TGGCATCACC CAGAACTGGG CGCGGTATCG CCGGCAGAAT TCATTCCGGT GGCAGAAGAC
ACTGGGCAAA TCCTGCCCAT TGGCGAGTGG GTGCTGCGCA CGGCGCTGGC GCAGTTGCGC
ACCTGGCATA GCCAGGGACT TCCGGCCCTG ACGATGGCAG TGAATCTGTC CGCCGTGCAG
TTCCGCCAGC CGCAGTTGCT GGAGCTGGTG GACCGGCTTC TCGCCGAGTA CGGAGTGCAG
CCCCACCTGC TGGAGCTGGA GCTGACCGAG AACGTGGCCG TCGCGGACCC CCACGCCGCG
ATCGCGACGA TGGACCAGCT CCACGCCAAA GGCGTGCGCC TGTCGATGGA TGACTTTGGT
ACCGGCTATT CGTCGCTGAG CCATCTCAAG CGATTCCAGA TCTACCGGCT GAAGATCGAC
CAGTCCTTCG TGCGCGACCT GGACCATGAC GGCAACGACC GCGCCATCGT CAGCGCCATC
ATCCGCATGG CGCAGGCGCT GGGCATGCGC ACCACGGCCG AGGGGGTAGA AACCGCCCAT
CAGCTGACGT TCCTGCGCGA ACAGGGCTGT GATGAAGCCC AGGGTTTCTA TTTCAGCCGG
CCCCTGGGGG CCCCGCATCT GCAGCAGTAT CTGCTGCAGC GCCCAGCCTG A
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| Protein sequence | MLQIRISNVT IFGLLSMSHP STALAQDPGQ VSPGAMQRVL REQQTLLDSA GVGIVFIRNR
ALVRCNQRCA EIFGLPSPED AIGRSSEALH PSRGAFRELG RAAYPTLARG QAYRTERQLK
RCDGQLFWAH LTGRLINPRD SREGSIWIID DIDEQKRAQA QLQAALWEKQ VLFDSAMVGI
VFLQERRMTR CNRHFEQILG YGPGELAGSS SRRWYLSDED WHEAGVRCYA PLVQGQAFEG
QMVLRTRDGR AIECEVRSKA VDPSNVAQGS IWIVMDVSER LRIQRQLAGM HGELEQQVRD
RTRELQETVG NLHREIQDRQ RDQERIYWMA HYDALTELPN RVLLAERGQD AIRQAQESGA
PLAVMFLDLD NFKHVNDSLG HRIGDALLVE IAQRLRTTVR QRDTVARLGG DEFVLLLPGA
NAQGAARVAA KMQEAALQPV HIQHHELSLA LSMGIALFPE HGSDFETLIQ SADTAMYRAK
ADGRNSFRFF TPTMQAQSAR ALQLTNALRR ALERNQLSLH YQPQVSIATG RVCGVEALLR
WHHPELGAVS PAEFIPVAED TGQILPIGEW VLRTALAQLR TWHSQGLPAL TMAVNLSAVQ
FRQPQLLELV DRLLAEYGVQ PHLLELELTE NVAVADPHAA IATMDQLHAK GVRLSMDDFG
TGYSSLSHLK RFQIYRLKID QSFVRDLDHD GNDRAIVSAI IRMAQALGMR TTAEGVETAH
QLTFLREQGC DEAQGFYFSR PLGAPHLQQY LLQRPA
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