Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2360 |
Symbol | |
ID | 4672606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2506993 |
End bp | 2508063 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639839427 |
Product | secretion protein HlyD family protein |
Protein accession | YP_986597 |
Protein GI | 121594701 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.451322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.672281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTC CCAAGAAAAT CCTCATCGCC GCAGCCGCAA TCGCTGCCAT CGCCGCACTG GGCGGCTACG CCTGGCTGCA GTGGAAGGAA ACGCAGCAGA ACGCCGGCCT TGTGGGCGGC AACGGGCGCA TCGAGGCCAC CGAGGTGGAC GTGGCCACCA AGTACGCCGG CCGCGTGGCC GAGATCCTGG TGCAGGAAGG CGACTTCGTG CAGGCCGGCC AGACACTGGC GCGCATGCAG GTGGACAGCC TGCTGGCCCA GCAGCGCGAG GCCGAGGCCA GCCGCGACCG CGCCCTGCAG GCCGTGGCCT CCGCGCGCGC CCAGGTGGCA CTGCGCGAGA GCGAGCACAC GGCCGCCCAG GCCCTGATCG CCCAGCGCGA GGCCGACCTG GACGCCGCTC AGCGCCGCGC GGCACGGTCG GAGACGCTGG CGCGCGAGGG CGCATCCTCC GAGCAGGAAC TGGACGATGA CCGGGCCCGC GTGCGCAGCG CACAGGCCGC GCTGAAGGCC ACGCAGGCAC AGGCGCAGGC CGCGGGCGCG GCCATCGTTG CGGCGCGCAC CCAGGTGGCC GGCGCCGAAT CGGCGGTAAA AGCCGCCGAT GCGACCGTGC AGCGCATCAA CGCCGACCTG GCCGACAGCG AACTCGCCGC CCCGCGCGAT GGCCGCGTGC AGCTGCGCCT GGCCCAGCCC GGCGAAGTGC TGGGCGGCGG CGGCAAGCTG CTGAACCTGG TGGACCTGAC CGACGTGTAC ATGAGCTTCT TCCTGCCCGA GACCGTGGCC GGCCGCGTAG CGCTGGGAAC CGAGGTGCGC ATCGTGCTCG ACGCCGCACC GCAGTATGTG ATCCCGGCCA AGGTGTCGTT CGTCGCCAGC ACGGCGCAGT TCACGCCCAA GACCGTGGAG ACGGCCAGCG AGCGGCAAAA GCTCATGTTC CGCGTGCGCG CGCGCATCGC ACCCGAGCTG CTGCGCAAGC ACATCACGCA GGTGAAGACC GGCCTGCCCG GCCAGGCCTG GATCAAGCTG GACGAGGGCC GCGACTGGCC GGCGCACCTG CACAACGTCG TGGCCCCCTG A
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Protein sequence | MTIPKKILIA AAAIAAIAAL GGYAWLQWKE TQQNAGLVGG NGRIEATEVD VATKYAGRVA EILVQEGDFV QAGQTLARMQ VDSLLAQQRE AEASRDRALQ AVASARAQVA LRESEHTAAQ ALIAQREADL DAAQRRAARS ETLAREGASS EQELDDDRAR VRSAQAALKA TQAQAQAAGA AIVAARTQVA GAESAVKAAD ATVQRINADL ADSELAAPRD GRVQLRLAQP GEVLGGGGKL LNLVDLTDVY MSFFLPETVA GRVALGTEVR IVLDAAPQYV IPAKVSFVAS TAQFTPKTVE TASERQKLMF RVRARIAPEL LRKHITQVKT GLPGQAWIKL DEGRDWPAHL HNVVAP
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