Gene Ajs_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2360 
Symbol 
ID4672606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2506993 
End bp2508063 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content72% 
IMG OID639839427 
Productsecretion protein HlyD family protein 
Protein accessionYP_986597 
Protein GI121594701 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.451322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.672281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC CCAAGAAAAT CCTCATCGCC GCAGCCGCAA TCGCTGCCAT CGCCGCACTG 
GGCGGCTACG CCTGGCTGCA GTGGAAGGAA ACGCAGCAGA ACGCCGGCCT TGTGGGCGGC
AACGGGCGCA TCGAGGCCAC CGAGGTGGAC GTGGCCACCA AGTACGCCGG CCGCGTGGCC
GAGATCCTGG TGCAGGAAGG CGACTTCGTG CAGGCCGGCC AGACACTGGC GCGCATGCAG
GTGGACAGCC TGCTGGCCCA GCAGCGCGAG GCCGAGGCCA GCCGCGACCG CGCCCTGCAG
GCCGTGGCCT CCGCGCGCGC CCAGGTGGCA CTGCGCGAGA GCGAGCACAC GGCCGCCCAG
GCCCTGATCG CCCAGCGCGA GGCCGACCTG GACGCCGCTC AGCGCCGCGC GGCACGGTCG
GAGACGCTGG CGCGCGAGGG CGCATCCTCC GAGCAGGAAC TGGACGATGA CCGGGCCCGC
GTGCGCAGCG CACAGGCCGC GCTGAAGGCC ACGCAGGCAC AGGCGCAGGC CGCGGGCGCG
GCCATCGTTG CGGCGCGCAC CCAGGTGGCC GGCGCCGAAT CGGCGGTAAA AGCCGCCGAT
GCGACCGTGC AGCGCATCAA CGCCGACCTG GCCGACAGCG AACTCGCCGC CCCGCGCGAT
GGCCGCGTGC AGCTGCGCCT GGCCCAGCCC GGCGAAGTGC TGGGCGGCGG CGGCAAGCTG
CTGAACCTGG TGGACCTGAC CGACGTGTAC ATGAGCTTCT TCCTGCCCGA GACCGTGGCC
GGCCGCGTAG CGCTGGGAAC CGAGGTGCGC ATCGTGCTCG ACGCCGCACC GCAGTATGTG
ATCCCGGCCA AGGTGTCGTT CGTCGCCAGC ACGGCGCAGT TCACGCCCAA GACCGTGGAG
ACGGCCAGCG AGCGGCAAAA GCTCATGTTC CGCGTGCGCG CGCGCATCGC ACCCGAGCTG
CTGCGCAAGC ACATCACGCA GGTGAAGACC GGCCTGCCCG GCCAGGCCTG GATCAAGCTG
GACGAGGGCC GCGACTGGCC GGCGCACCTG CACAACGTCG TGGCCCCCTG A
 
Protein sequence
MTIPKKILIA AAAIAAIAAL GGYAWLQWKE TQQNAGLVGG NGRIEATEVD VATKYAGRVA 
EILVQEGDFV QAGQTLARMQ VDSLLAQQRE AEASRDRALQ AVASARAQVA LRESEHTAAQ
ALIAQREADL DAAQRRAARS ETLAREGASS EQELDDDRAR VRSAQAALKA TQAQAQAAGA
AIVAARTQVA GAESAVKAAD ATVQRINADL ADSELAAPRD GRVQLRLAQP GEVLGGGGKL
LNLVDLTDVY MSFFLPETVA GRVALGTEVR IVLDAAPQYV IPAKVSFVAS TAQFTPKTVE
TASERQKLMF RVRARIAPEL LRKHITQVKT GLPGQAWIKL DEGRDWPAHL HNVVAP