| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2358 |
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| Symbol | rho |
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| ID | 4672600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2504015 |
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| End bp | 2505277 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639839425 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_986595 |
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| Protein GI | 121594699 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.139464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.694538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTTA ACGAACTCAA GGCACTGCAC GTGTCTGAAG TCCTCAAGCA GGCCGAAGAC
CTGGAAATCG AAAACGGCGG CCGCATGCGC AAGCAGGAGC TGATGTTCGC CATCATCAAG
AAGCGTGCAA AAGCCGGCGA GCAGATTTTT GCCGACGGCG TGCTTGAGAT CCTGCCCGAC
GGCTTCGGCT TCCTGCGCAG CCCCGACACC AGCTACACCG CGAGCACCGA CGACATCTAT
ATCAGTCCGA GCCAGGTGCG CCGCTTCAAC CTGCACACCG GCGACATGAT CGAAGGCGAG
GTGCGCACGC CCAAGGATGG CGAGCGTTAC TTCGCGCTGA CCAAGCTTGA CTCCGTCAAC
GGCGGCCCGC CCGAGCAGAA CAAGCACAAA GTGATGTTCG AGAACCTCAC GCCGCTGTTC
CCCAAGGAGC AGATGCGGCT GGAGCGCGAG ATCAAGGGCG AGGAGAACAT CACCGGCCGC
ATCATCGACA TCATTGCCCC CATCGGCCGC GGCCAGCGCG CGCTGATCGT CGCGCCTCCG
AAGAGCGGCA AGACGGTGAT GATGCAGCAC ATCGCCCATG CCATCACGGC CAACAACCCC
GATGTGCACC TGATGGTGCT GCTGGTGGAC GAGCGCCCCG AGGAAGTGAC CGAGATGCAG
CGCTCGGTCA AGGGCGAAAT CATTGCATCG ACCTTCGACG AGCCCGCCGC ACGCCACGTG
CATGTGGCCG AGATGGTGAT CGAGCGCGCC AAGCGCCTCG TGGAACTGAA AAAGGACGTG
GTGATCCTGT TGGATTCCAT CACCCGCCTG GCCCGCGCCT ACAACAACGT GGTGCCCTCC
AGCGGGAAGG TGCTCTCCGG CGGCGTGGAC TCCAACGCTC TGCAACGCCC CAAGCGCTTC
TTCGGCGCGG CGCGCAAGGT CGAGGAAGGC GGCTCGCTGA CCATCATTGC CACGGCGCTG
GTCGATACCG GCAGCCGCAT GGACGAAGTG ATCTTTGAAG AATTCAAGGG CACGGGCAAC
TGCGAAATCC ACCTGAGCCG CCGCCTCTAC GAAAAGCGCG TGTTCCCGGC CATCGAGCTC
AACAAGAGCG GCACACGCCG AGAGGAACTG CTGCTGGCAC CCGAAATCCT GCAGAAGACG
CGCATCCTGC GCCAGTTCAT GTACAACATG GACGAGATCG AGTCCATGGA ACTCATGATC
AAGAAGATGA AGGAAACCAA GACCAACGTG GAGTTCTTCG AGGCCATGCG CCGCGGCGGC
TGA
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| Protein sequence | MHLNELKALH VSEVLKQAED LEIENGGRMR KQELMFAIIK KRAKAGEQIF ADGVLEILPD
GFGFLRSPDT SYTASTDDIY ISPSQVRRFN LHTGDMIEGE VRTPKDGERY FALTKLDSVN
GGPPEQNKHK VMFENLTPLF PKEQMRLERE IKGEENITGR IIDIIAPIGR GQRALIVAPP
KSGKTVMMQH IAHAITANNP DVHLMVLLVD ERPEEVTEMQ RSVKGEIIAS TFDEPAARHV
HVAEMVIERA KRLVELKKDV VILLDSITRL ARAYNNVVPS SGKVLSGGVD SNALQRPKRF
FGAARKVEEG GSLTIIATAL VDTGSRMDEV IFEEFKGTGN CEIHLSRRLY EKRVFPAIEL
NKSGTRREEL LLAPEILQKT RILRQFMYNM DEIESMELMI KKMKETKTNV EFFEAMRRGG
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