| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2313 |
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| Symbol | |
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| ID | 4673894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2450088 |
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| End bp | 2454113 |
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| Gene Length | 4026 bp |
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| Protein Length | 1341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839381 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_986551 |
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| Protein GI | 121594655 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCA CGATCACCTT TCCCGAGCAA CTCCCCGTCT CCAGCCGCCG CGACGAGATC
ATGGCGGCCA TGGCCGAGCA CCAGGTCATC ATCGTCTGCG GCGAGACGGG CTCGGGCAAG
ACCACGCAGC TGCCAAAAAT AGCGCTGGCC CTGGGACGCG GCAAGTGCAA TGCGCCCGAG
GGCACGCGCG GGCGCCTGAT CGGCCACACC CAGCCGCGGC GCATTGCCGC CAGCAGCGTG
GCCAAGCGCA TTGCCGAGGA GCTGAACACC CCCTTGGGCG AGGTGGTGGG TTACAAGGTG
CGCTTTCAGG ACACGCTGCA AAAGGGCGCT TCGGTCAAGC TGATGACCGA CGGCATCCTG
CTGGCCGAGA CGCAGACCGA TCCGCTGCTC AAGGCCTACG ACACGCTCAT CCTCGACGAG
GCGCACGAGC GCAGCCTGAA CATCGACTTC CTGCTGGGCT ACCTCAAGCA GATCCTGCCG
CAGCGGCCCG ATTTGAAGGT GGTCGTGACA TCGGCCACCA TCGACGCGGA GCGCTTCGCC
AAGCACTTCG AGGGCAAGGC CGGTCCGGCG CCGGTCATCA TGGTGTCCGG GCGCACCTAT
CCCGTGGAGA TGCGCTACAA GCCCTTTGAA GAAAAGAAGG ACTTCGACCT CAACGATGCC
ATTGCCGACG GCGTGGACGA GTTGTGGGCG GGCGGCAAGG GCGGAGACAT CCTCGTCTTC
CTGCCCGGCG AGCGCGAGAT CCGCGAGGCG GCGGACCACC TGCGCAAGCA CCTGCAGCAC
TCGCCGGTGC TGAGGAACGC CGAGGTACTC CCCCTGTTCT CGCGCCTGTC GCAGGCCGAG
CAGGACCGCA TCTTCGACGG CCACACCGGA CGGCGCATCG TGCTGGCCAC CAACGTGGCC
GAGACCTCGC TCACCGTGCC GGGCATCCGT TACGTCATTG ACGCAGGTAC GGCGCGCGTG
AAGCGCTATT CCTTCCGTAG CAAGGTGGAG CAGTTGCTGG TGGAGCCCAT CAGCCAGGCG
GCGGCCAACC AGCGCGCCGG GCGCTGCGGC CGCGTGGCCA ACGGCATCTG CATCCGCCTG
TACGACGAGG CGGACTTCCA CCAGCGCGAC CGCTTCACCG ACCCCGAAAT CCTGCGCTCG
TCCCTGGCGG GCGTCATCCT GCGCATGAAG TCGCTGGGCC TGGGCGACGT GGTGAACTTC
CCGTTCCTCG AGGCGCCCTC GGGCCGTGCG ATCGCCGACG GCTATCAACT GCTGCAGGAG
TTGGGCGCCG TGGACGAGCG CGGCAATTTG CTGCCCATGG GCCGCGAACT GTCGCGCCTG
CCCTTGGACC CGCGCGTGGG CCGCATGATC CTGGAGGCCC GCACCCGCGG CGCCGTGGCC
GAGGTGCTGG TCATTGCCTC GGCCCTCAGC GTGCAGGACG TGCGCGACCG GCCGCTGGAG
GCGCAGCAGC AGGCCGACCA GCAGCATGCC AAGTTCGATG ACGAGAAAAG CGAGTTCACC
GGCTACCTGC GCCTGTGGAA GTGGCTGCAG GATGCGCGCG GCGGCAAGAT CGTCGCCAAG
ACGCGCAAGG AGATGGCGGC CCAGACCGCC CCCGCGGCCC AAGCGCGCAA CACGGCCTTC
CTGCCCGTCG CACAGCGCAG CAGCGGCGCG CAAGCGGAGG CCGCAGGCGA GGAGCGCCTG
GCGCAGTTCC ACCCCGCCGA TGCGGAGGAG GCCACACACA AGCTCAGCAA CCGGCAGTGG
GAGCAGTTGC TGCGCCAGAA CTACATCAAC ATCCGCCGCG TGCGCGAGTG GCGCGACATC
CATTCGCAGC TGCTCACCGT GGTGCGGGAG CACCAGTGGC AGGTGAACAC CGAGCCCGCG
GGCTACGAGG CCGTGCACCT GTCCATGCTG TCGGGCCTGC TGGGCAACAT TGGTTACAAG
GCCGAGGAGA GCGAGGCCTA CCTGGGCGCG CACGGCATCA AGTTCCACCC GCACCCGGGC
GCGCACCTGT CCAAGAAGCC CGGCCGCTGG ATCGTCGCAG CCGAGCAGGT CGAGACCTCG
CGCCTGTACG GCCGCGGTAT CGCGGCGATC GAACCGCAAT GGCTGGAAGA GGTGGGCGGC
CATCTGCTCA AGAAGCAGCT GCTGGACCCG CATTGGTCCA AGAAACAGGC CGACGTGGTG
GCGCTCGAGC GCGCCACGCT CTACGGCCTG GTGGTCTACA GCGGCCGCCG CGTGAGCTAT
GGCCGCGTGG ATCCGTACGA GGCGCGCAAC CTGTTCATTC GCCAGGCGCT GGTCGAGGGC
GAGTGGGAGA CGCATTGGCC GTTCCTGGGC GCCAACCTCA AGCTGGTGCG CAAGGTGCAG
GAGCTGGAGC ACAAGAGCCG CCGCCAGGAC GTGCTGGTGG ACGACGAGCT CATCTTCGCC
TTCTACGACC AGCAGATTCC CAAAGACGTG TACAGCGGCG CCACGTTCGA CAAGTGGTTC
CGCAGTGCCG GCAAGGAGAA CGCCGGCCTG CTGCTTCTCA AGCGCGACGA GCTGATGCGC
CATGAGGCCG CGGGCATCAC CACCGACAAC TTTCCCAAGA CGGTGAAGCT GGGCGGCGTG
GACTGCACGG CCAGCTACCT GCACAGCCCC GGTGACGCGC GCGATGGGGT CACCGTCACG
GTGCCGCTGT TCGTGCTGAA CCAGGTGAGC GAGGAGCGTG CGGAATGGCT GGTGCCCGGC
ATGCTCAAGG ACAAGATCCA GGCGCTGCTC AAGAGCCTGC CGCAGCGCCC GCGCAGCCGT
TTCGTGCCGC TGCCGGAAAG TGCTGCGCGG CTGGCGTCGC TGTTCACCGA GGAAGAGCGT
TGGGCCCGGG GCAGCTTGAT CGACACGCTG CTCAAGCAAG TGCGCGATGA AACCTCGCTC
GACGTGAAGC GCGCGGACTT CAAGCTGGAC ATGCTCAGCC CGCACCTGTT CATGAACTTT
CGCGTGACGG ATGAGCACGG CCGCCAGCTC GGCCAGGGAC GCAACCTGGG CGCGCTCAAG
GCGGAGTGGG GGAGCAAGGC TCGTGGGGCG TTCCAGGCGC TTGCTTCATT AAAGATAGCT
GGTGGCGCTC ACCAGAAGCC AGATTCCGGT CGAAAACCAT ATGAAACCAA GGAAAACCGG
GCGCCAGCAG CTATCAAAAA AGAACCACTC GTCGGCGCGC CCGCGGCCCG CAAGGCCGAT
GCCCGCTACG AGGATTGGAG CTTTGGCGAA CTGCCCGAGC TGATGGAAAT CGCCAAGGGC
AGCCAGACGC TGATCGGTTT CCCCGCGCTC ATCGACCACG GCGATGCGGT GGGCATCGAG
GTGTTCGACG AACCCGAAGT CGCCGCCGCG CGCCACCGCG TGGGCCTGCG CCGGCTGTTT
GCGCTGCAGA TCAAGGACGC GCTCAAGTAC CTGGAAAAGA ACATCCCCGA TCTGCAGAAG
ATGGCCGTGG CCTTCATGCC GCTGGGCACG CAGGAGGAGC TGCGCGCACA AATCATCGAC
GTGGCCATCG ACCGCGCCTT CCTGCAAGAG CCGCTGCCCA GCAACGAGGC CCAGTTCAAG
CAGCGTGTGC AGGACGGGCG CGGGCGCCTC ACGCTGATCG CCAACGAGGT GGCGCGCATG
GCGGCGGCCA TCCTCATCGA ATACGCCGCC ACGCAGCGCA AGATCAAAGA CACCAAGAAC
GCTCCCGAGG CCACGGCCGA CGCGTCACAG CAGCTGCAGC GCCTGATGCC CAAGCAGTTC
ATCGCCGCCG CGCCCTGGGC GCAGCTGCAG CACTACGCGC GCTACCTCAA GGCCATCGCC
ACGCGCCTGG ACAAGTACCG CGCCGACCCG GCACGCGATG CCGCCAAGCT CAAGGAACTG
CAGCCGCTGG AGCAGCGCTA TTGGCGCCTG GTGGCCGAGC GCAAGGGCCA GGTGGATGCC
CGCATGCAGG AGTACCGCTG GATGCTGGAG GAACTGCGCG TGAGCTTCTT CGCGCAGGAG
TTGCGCACGC CGTATCCGGT CAGCGGCAAG CGGCTGGACA AGGTCTGGTC GCAACTGGTG
TCTTGA
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| Protein sequence | MPLTITFPEQ LPVSSRRDEI MAAMAEHQVI IVCGETGSGK TTQLPKIALA LGRGKCNAPE
GTRGRLIGHT QPRRIAASSV AKRIAEELNT PLGEVVGYKV RFQDTLQKGA SVKLMTDGIL
LAETQTDPLL KAYDTLILDE AHERSLNIDF LLGYLKQILP QRPDLKVVVT SATIDAERFA
KHFEGKAGPA PVIMVSGRTY PVEMRYKPFE EKKDFDLNDA IADGVDELWA GGKGGDILVF
LPGEREIREA ADHLRKHLQH SPVLRNAEVL PLFSRLSQAE QDRIFDGHTG RRIVLATNVA
ETSLTVPGIR YVIDAGTARV KRYSFRSKVE QLLVEPISQA AANQRAGRCG RVANGICIRL
YDEADFHQRD RFTDPEILRS SLAGVILRMK SLGLGDVVNF PFLEAPSGRA IADGYQLLQE
LGAVDERGNL LPMGRELSRL PLDPRVGRMI LEARTRGAVA EVLVIASALS VQDVRDRPLE
AQQQADQQHA KFDDEKSEFT GYLRLWKWLQ DARGGKIVAK TRKEMAAQTA PAAQARNTAF
LPVAQRSSGA QAEAAGEERL AQFHPADAEE ATHKLSNRQW EQLLRQNYIN IRRVREWRDI
HSQLLTVVRE HQWQVNTEPA GYEAVHLSML SGLLGNIGYK AEESEAYLGA HGIKFHPHPG
AHLSKKPGRW IVAAEQVETS RLYGRGIAAI EPQWLEEVGG HLLKKQLLDP HWSKKQADVV
ALERATLYGL VVYSGRRVSY GRVDPYEARN LFIRQALVEG EWETHWPFLG ANLKLVRKVQ
ELEHKSRRQD VLVDDELIFA FYDQQIPKDV YSGATFDKWF RSAGKENAGL LLLKRDELMR
HEAAGITTDN FPKTVKLGGV DCTASYLHSP GDARDGVTVT VPLFVLNQVS EERAEWLVPG
MLKDKIQALL KSLPQRPRSR FVPLPESAAR LASLFTEEER WARGSLIDTL LKQVRDETSL
DVKRADFKLD MLSPHLFMNF RVTDEHGRQL GQGRNLGALK AEWGSKARGA FQALASLKIA
GGAHQKPDSG RKPYETKENR APAAIKKEPL VGAPAARKAD ARYEDWSFGE LPELMEIAKG
SQTLIGFPAL IDHGDAVGIE VFDEPEVAAA RHRVGLRRLF ALQIKDALKY LEKNIPDLQK
MAVAFMPLGT QEELRAQIID VAIDRAFLQE PLPSNEAQFK QRVQDGRGRL TLIANEVARM
AAAILIEYAA TQRKIKDTKN APEATADASQ QLQRLMPKQF IAAAPWAQLQ HYARYLKAIA
TRLDKYRADP ARDAAKLKEL QPLEQRYWRL VAERKGQVDA RMQEYRWMLE ELRVSFFAQE
LRTPYPVSGK RLDKVWSQLV S
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